>PF16143 (193 residues) RGVSGKDVVSSSRPPVVVRPAAGFDLLGSGAASPVLDTELGLRHADVGWAFYADVARERQ LAVVLSETPDGWQWELDVSSPWHEVRRDVYATGPARFAGATFLMPASADPFALMLPAPPA QHADEGQWRWLVRRYTQLFDFRAVKLVVEYREPIPAGVGEQLADALDAGQQPAGRAAALL GEFEARSRAAFSV |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | RGVSGKDVVSSSRPPVVVRPAAGFDLLGSGAASPVLDTELGLRHADVGWAFYADVARERQLAVVLSETPDGWQWELDVSSPWHEVRRDVYATGPARFAGATFLMPASADPFALMLPAPPAQHADEGQWRWLVRRYTQLFDFRAVKLVVEYREPIPAGVGEQLADALDAGQQPAGRAAALLGEFEARSRAAFSV | |||||||||||||||||||
1 | 4ashA | 0.11 | 0.07 | 0.65 | 0.67 | DisCoVER | ----------------AWRVVQFGTGWGFW-VSG-----------HVFITAKHVATSSGDFLKYYFTSAVRIPAMVLEGCQGVVASVLVKRASGEMLALAVRMGSQAAIKIAVVHG----------QTGMLLAGCPYVYKKWVVIGVHVAAVIAA----------------THGEPTLEA------------- | |||||||||||||
2 | 3c4aA | 0.08 | 0.06 | 0.70 | 0.67 | DEthreader | --GAGGLASQQAR-I-IENEVL-GWG-VVLPGRP---------GQHPAN--------------PLSYL---DAPEPVERR---------G-----LVHALKCIIRPLVLANGNHKTAHFTLDGKLV--LLGDALQSGHFSIG-GTTAVVAQLALVQLFRGHADNSRWSFDAR--PPEALAQNLRYA-L----- | |||||||||||||
3 | 1s1dA | 0.08 | 0.08 | 0.94 | 0.69 | CEthreader | VILSDGDGTVEKGFKAEWLAVKDERLYVGGLGKEWTTTTGDVVNENPEWVKVVGYKGSVDHENWVSNYNALRAAAGIQPPGYLIHESACWSDTLQRWFFLPRRASQERY------------SEKDDERKGANLLLSASPDFGDIAVSHVGAVVPTHGFSSFKFIPNTDDQIIVALKSEEDSGRVASYIMAFTL | |||||||||||||
4 | 2vqiA1 | 0.06 | 0.04 | 0.67 | 0.77 | EigenThreader | YAPQVPADLDSSVRGRLDVEVGRKKTFQYTVSVNRYFFLQGVAVGLSASRSKYLG---RDNDSAYLRISVPTYSGSSNDRDGLDSYSLNAGLNSQRQNAYYSHRSPL---------------------ANLSANIASLQKG---YTSFGVSATITG------------------------------------- | |||||||||||||
5 | 6j27A | 0.17 | 0.13 | 0.78 | 0.30 | HHpred | -------------------------RVEEGLDLLA---EVPAP-RPGEAAPACEGRGERRFLAWAKERPEIQDFDQGYVTPESTLARVALAWNWGDLEGKEVLVLGDDDLTGLAAA----LTG--LPKRRFLERAAKAEGLPLEAHVHDLREPLPEAWVTFFTD--------PVEGPLGLQAFVGRGLLALEG | |||||||||||||
6 | 5ftxA | 0.06 | 0.03 | 0.52 | 0.50 | MRFsearch | --------------LETIAVDSTGVSVAKATFKVTLKDQGNKFTGNVNVTSDK---TETATVSVSNSGIGQSEYTVTVNGVAEGSTTITIKSGTKEVKVPVNVVAGG----------------------------------PVANYQIKVL------------------------------------------ | |||||||||||||
7 | 5z8oA | 0.08 | 0.06 | 0.73 | 0.48 | FFAS-3D | -GHMVSKTVEVAASAEIVSDFEAYPQWNPEIKGCWILARYNDGRPSQLRLDVEIQGQSGVFITAVYYPAEN------------QIFTMLQQGDHFTKQEQRFSIVPLGP--------------------------------DSTLLQVDLDVEVKLPVPGPMVKKLAGET-----LEHLAKALEGRVEQL--- | |||||||||||||
8 | 5f9pA | 0.10 | 0.09 | 0.94 | 0.58 | SPARKS-K | ISAEDKHL-----TVLNLFTTDTPKLIEETKIVDAATYEGWS------STVHSGVDSHGTLNFIQWRSGEDLEFKHRTLPVFGEITTSIRLQNEVAHTLTSIEIGPGRDDYTVFTVFPVTPQGQDEALDALGPGQAFLAQVPGFRAHVVLKGLRARGLEGDSKQAWEAYRDQAPDQDEARKAAVGRVRAVVAG | |||||||||||||
9 | 2eadA | 0.08 | 0.07 | 0.82 | 0.68 | CNFpred | -------------GDIYLDYGF-DLNLSKGKADVTFKHD----GVTYTREYFASNPDNVMVARLTASKAGKLNFNVSMPTNTNYSKTGETTTVKGDTLTVKGALGNNGLLYNSQIKVVLDNEGTLSE------ASLKVSDAKAVTLYIAAATDYKQKYPSYRTG----------TAAEVNTRVAKVVQDAANK | |||||||||||||
10 | 2lnjA | 0.04 | 0.03 | 0.68 | 0.83 | DEthreader | ---GQRYSDT--KDGYEFLYPNGWIG-VDVKGASP---------G-VDVVFRDLI-ERDENLSVIISEIPSDTL-VRFMKQAELINAEARDEDGQVYYTLEYRVL-VG----------------D-NVERHDLASVTTNR--GKLITFDLSTAED--R--------------------WD-TVKSLFDTVASF | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |