>PF16142 (187 residues) HVQVPLYGITALNPVDDGLLKNFKYCNPKNCQFNFKLPAEQAKNLKLIAIPEIGVVLVPR TWQDIQADAGANGTGYALIISPDQKQAIQLYDSSLCVGCGLPYASLYFPELLKESIENEF GGYQDSQKLMNVVHPSKHTAFFSYQIPKLNNKTHGVAKYHDDGDFNFREIKVTLDKSQQH LVGPILN |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | HVQVPLYGITALNPVDDGLLKNFKYCNPKNCQFNFKLPAEQAKNLKLIAIPEIGVVLVPRTWQDIQADAGANGTGYALIISPDQKQAIQLYDSSLCVGCGLPYASLYFPELLKESIENEFGGYQDSQKLMNVVHPSKHTAFFSYQIPKLNNKTHGVAKYHDDGDFNFREIKVTLDKSQQHLVGPILN | |||||||||||||||||||
1 | 4r1dB | 0.08 | 0.05 | 0.68 | 0.83 | DEthreader | ----M--------------------------------D--KT-GWITHCFGRF-LIDLPPDAV-INAGYYLWERFGVGVTFPEPGARFEFRSSTG-A--ELN-S--LLE-RV----------DGFQNMLTRKGKHPLPGEEYLVAGSDQRGYTFMWEVQGKE--EPNLTAGLAVAFKEAELWDTIVD | |||||||||||||
2 | 2lnjA | 0.08 | 0.06 | 0.74 | 0.83 | DEthreader | ----------------------GPLGSCGGVG---------IASLQRYSDTKDGEFLYPNGWIGVDVKGA-P-GVDVVFRDLERDENLSVIISEIPS--TL--LG-TATDVGY-R------KTVNQAELINAEARDQVYYTLEYRVLVVERHDLASVTTNR--G-KLITFDLSTAERWVSLFDTVAS | |||||||||||||
3 | 2xb3A | 0.12 | 0.09 | 0.74 | 0.30 | HHpred | ------------------------------------------SGLQAYVDSYDGYFLYPRGWVQVQVE---DP-VDVVFHDIIETENVSVVVNTVASTKSLEELGSP-EEVGDRLLRNIIAPSERSSALIASQKADDKTYILEYAVTLPAQQRHNLSSIAVS-RGKVYTLSVSAPEEREDQFKTIVS | |||||||||||||
4 | 2xb3A | 0.12 | 0.09 | 0.74 | 0.73 | MRFsearch | --------------------------------------------LQAYVDSYGYEFLYPRGWVQVQVE----DPVDVVFHDIITTENVSVVVNTVASTKSLEELGEVGDRLLRNIIAPSESGRSSALIAATSQKADKTYYILEYAVTLPAQQRHNLSSIAVSR-GKVYTLSVSAPEEREDQFKTIVS | |||||||||||||
5 | 2xb3A | 0.10 | 0.07 | 0.72 | 0.73 | SPARKS-K | ------------------------------------------SGLQAYVDSYDGEFLYPRGWVQVQ----VEDPVDVVFHDIIETTSVVVNTVASTKSLEELGSP---EEVGDRLLRNIIA-PSESGRSSALIAATSYILEYAVTLPAQQRHNLSSIAVSRG---KVYTLSVSAPPKVEDQFKTIVS | |||||||||||||
6 | 3jcuP | 0.10 | 0.07 | 0.72 | 0.92 | MAPalign | -------------------------------------------EFMPYNG-DGFKLLVPSKWNPSKEKE--FPGQVLRYEDNDATSNLSVLVQPT---DKKSIDFGSPEDFLSQSEGGFDSGVVASANVLESSTPVVKYYSITVLTREGGKHQVIAATVK---DGKLYICKAQAGDKRKKFVESAT- | |||||||||||||
7 | 3jcuP | 0.11 | 0.09 | 0.77 | 0.89 | CEthreader | -----------------------------------------NTEFMPYNG-DGFKLLVPSKWNPSKEKEF-PGQVLRYEDNFDATSNLSVLVQPTPEDFLSQVDYLLGKQAYFGKTDSEGGFDSGVVASANVLESSTPSITVLTRTADGDGGKHQVIAATVKDGKLYICKAQAGDKRWFKGAKKFVE | |||||||||||||
8 | 2xb3A | 0.11 | 0.08 | 0.74 | 0.53 | MUSTER | ------------------------------------------SGLQAYVDSYDGEFLYPRGWVQVQ----VEDPVDVVFHDIIETTNVSVVVNTVASTKSLEELGSP-EEVGDRLLRNIIAP-SESGRSSALIAATSTYYILEYAVTLPAQQRHNLSSIAVSRG-KVYTLSVSAPPKVEDQFKTIVS | |||||||||||||
9 | 2xb3A | 0.12 | 0.09 | 0.74 | 0.66 | HHsearch | ------------------------------------------SGLQAYVDSYDGYFLYPRGWVQVQVE---DP-VDVVFHDIIETENVSVVVNTVASTKSLEELGS-PEEVGDRLLRNIIASGRSSALAATSQKADKTYYILEYAVTLPAQQRHNLSSIAVSRGKV-YTLSVSAPEEREDQFKTIVS | |||||||||||||
10 | 2xb3A | 0.11 | 0.08 | 0.75 | 0.69 | FFAS-3D | ------------------------------------------SGLQAYVDSYDGYFLYPRGWVQVQ---VEDPVDVVFHDIIETTENVSVVVNTVASTKSLEELGS-PEEVGDRLLRNIIAPSESGRAATSQKADDKTYYILEYAVTLPAQQRHNLSSIAVSRGKVYT-LSVSAPEEREDQFKTIVS | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |