Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | FKGKDAVYFQLQTDDYYWTQTLDSMVYTFAGKGVEEDTLWVRVNLQGDAVPYARDILVVTDDEKTTAEEGLHYEALKPVYELPADAVYTRIPVIIYNKDEELEKKQVTIALALKSSDELDLGITDRRTCRLLVSNMLGKPLYWEETISWDFGEYSRKKHELCILELG |
1 | 3p02A | 0.10 | 0.09 | 0.87 | 1.17 | DEthreader | | DEQFQLISFKT---------QPGVTDVHV-RYASAKYTYNLPVLVS-G--TDDRLVSFSLRDDLRELPQ-KYYS-FPKELTIPAGQSHALLPIEFSLD-GLDDSQKWALPLKVCEDN-GTYVNPRYRTAVLRPILFSGRF--S---GSSLLSSIKLVFLFTYKVSST |
2 | 3pohA | 0.15 | 0.13 | 0.88 | 1.17 | DEthreader | | GIYENNAYLRDGKSN------LVSKVVELH---GETYATTVK-GLSK-TPNTATSAKVKIDAALALYPQD-LVTFAEGILTVNANTKSAEVE-TIRA-GEGLQEKTYAIPVAISDQSSDITIKDEDAHCIYLVKDAGDAY-QGYLF-PTFLWLRRRGV--GE-LYG- |
3 | 3nqkA1 | 0.15 | 0.11 | 0.74 | 1.51 | HHsearch | | ----QYVSFKAPIAS----GSDGVTTIYVRYKDNGKVTYQLPIIVSGSVNSQDRDIHIAVDKDTYTEEE-DKYEF-PETVHIPAGSCVELLNIDFNL--QDIDLEKWVLPLTIVDDGSYAYQ-KNYAKALLKVVPF------------------------------- |
4 | 3p02A | 0.11 | 0.09 | 0.84 | 1.00 | DEthreader | | DEQFKLISFKTQP--GG----WGVTDVHVRYANSAKYTYNLPVLVS--G-TDDRLVSFSLRDDLRELPQ-KYYS-FPKELTIPAGQSHALLPIEFSLDG-LDDSQKWALPLKVCEDNGTYVNPKYYRTAVLRPILFNSGRF-----------RDLDTKPDEDQ---- |
5 | 3pohA | 0.14 | 0.13 | 0.91 | 1.17 | DEthreader | | GIYENNAYLRDGKS------NLVSKVVEL-H--GETYATTVK-GLSKTPN-TATSAKVKIDAALALYPQD-LVTFAEGILTVNANTKSAEVE-TIRAGEGLQEDKTYAIPVAISDQSSDITIKDDAKHCIYLVKDNAGAGYL-FFEVVNPLLLQPLRRRGV-YSNVA |
6 | 4jx0A | 0.09 | 0.08 | 0.85 | 1.00 | DEthreader | | LPFTDLVYLGY-------YG-NPYTQLEAINNTTLKNELSFKVKV-TKPYKEDIKVNL-KEDKVPLFPSE--NCTF-EGGVLKAGELETTVKLTLKVEKLNN-LSGYV-AIKLTEGSHLAIA-RTRSSYFVKLNLSI-------SNANNYLTCRVNHG-VFDRKFG- |
7 | 3p02A | 0.14 | 0.11 | 0.81 | 0.69 | HHpred | | --FKQLISFKTQPGG----WGV--TDVHVRYANSAKYTYNLPVLVSGT---DDRLVSFSLRDDTFRELPQKYYSFP-KELTIPAGQSHALLPIEFSL--DGLDSQKWALPLKVCEDNTYAVNPRKYRTAVLRPI-----LF------NEFSGRFSGSSLL------- |
8 | 3fq4B | 0.09 | 0.06 | 0.67 | 0.74 | DisCoVER | | M--RDVVSF-----------EQPEFSVSRG-----DQVARIPVIRRVLDG-GKSQVSYRTQ--DGTAQGNRDYIPVEGELLFQPGEAWKELQVKLLE---LRGRQVRRFHVQLSNPKFGAHLGQ-PHSTTIIIRDPD------------------------------ |
9 | 3nqkA1 | 0.14 | 0.10 | 0.74 | 0.58 | MRFsearch | | ------VSFKAPI----ASGSDGVTTIYVRYKDNGKVTYQLPIIVSGSTVSQDRDIHIAVDKDTLLYRPELWYTEEEETVHIPAGSCVELLNIDFNL--QDIDLEKWVLPLTIVDDGSYAYQ-KNYAKALLKVVPF------------------------------- |
10 | 3nqkA1 | 0.13 | 0.10 | 0.75 | 0.96 | SPARKS-K | | ----QYVSFKAPIAS----GSDGVTTIYVRYKDNGKVTYQLPIIVSGTVNSQDRDIHIAVDKDTSLYRPELWYTEFPETVHIPAGSCVELLNIDFNLQ--DIDLEKWVLPLTIVDDGSYAYQ-KNYAKALLKVVPF------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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