>PF16126 (273 residues) AHTAYSLVPPDQYFGAHPEYFSEVNGKRVGKGGQLCLSNPDVLKIATAGVRQWARDEPEA DIISVSETDSHGHCQCGNCRILIDREGSHAGPLLHFVNRIADNIREEFPELAVGMLAYNH MYSRIPPKHVRPRPNVVVRLVTSGCCRFHSLATCDSDFAYEGSVQFRDDITGWKNAGDSL YVWNYVADYGDFLAPLPNLHILQSDIRFFIEHNVKGIFEQGISGMPGGEFAELRSYLLAR CLWQPECDWQQVMDEFLEAYYGAAATSIRAYID |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 | | | | | | | | | | | | | | |||||||||||||
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Seq | AHTAYSLVPPDQYFGAHPEYFSEVNGKRVGKGGQLCLSNPDVLKIATAGVRQWARDEPEADIISVSETDSHGHCQCGNCRILIDREGSHAGPLLHFVNRIADNIREEFPELAVGMLAYNHMYSRIPPKHVRPRPNVVVRLVTSGCCRFHSLATCDSDFAYEGSVQFRDDITGWKNAGDSLYVWNYVADYGDFLAPLPNLHILQSDIRFFIEHNVKGIFEQGISGMPGGEFAELRSYLLARCLWQPECDWQQVMDEFLEAYYGAAATSIRAYID | |||||||||||||||||||
1 | 1b1yA | 0.10 | 0.09 | 0.89 | 1.17 | DEthreader | IMSFHQIPIPQWVRDVGDDIFYTDHGTRN--IEYLTLGVNSAVQMYADYMTSFRENMKLIVDIEVGGPAPSPICYDKYLQDFAFFLAWYSNNLIKHGDRILDEANKVFLYVQLAIKIAGVAAGYGYRTIRMLRHRASINFTCAEMRDSE---------MSAPEELVQQVLSAGWREGLNVSCENALPR------YDPTYNTILRNARPHPEHKLFGFTYLRLSNQLVEGQNYVNFKTFVDRMHANDLPVGPTGGMGGQAEG------------ | |||||||||||||
2 | 1b1yA | 0.09 | 0.08 | 0.89 | 1.17 | DEthreader | IMSFHQIPIPQWVRDVGDDIFYTDHGTRNI--EYLTLGVNSAVQMYADYMTSFRENMKLIVDIEVGGPYPSYFICYDYLQFAFFLAWYS-NNLIKHGDRILDEANKVFLGYQLAIKIAGVHEYNGYRTIRMLRHRASINFTCAEMRDSEQ---PP---MSAPEELVQQVLSAGWREGLNVSCENALPR--------YDPTAYNTILRNARPHKLFGFTYLRLSNQLVEGQNYVNFKTFVDRMHANDLPVGPTGGMGGQAEG------------ | |||||||||||||
3 | 2epoA | 0.09 | 0.08 | 0.85 | 1.67 | HHpred | AHL--------SAFVKWGIKEELRDV-----EDILLIGEEKVYDLIEGMFQTMAH-LH-TRKINIGMDEAHLVGLGRYLIKHGFQ--NRSLLMCQHLERVLDIADKYGF--NCQMWSD--MFFKLMEETLRLKERVTLVYWDY------YQDS---------EEKYNRNFQNHHKISQDIAFAGGAWKWIG-FTPHFSRLVAIEANKACRKNQVKEVIVTGWGDNTSQFSVLPALQIWAELAYRNDLK--KVSEHFLVSTGLDFDDFMKDLA- | |||||||||||||
4 | 2epoA | 0.09 | 0.08 | 0.85 | 2.00 | HHsearch | AHLSAFV--------KWGIKEELRDV-----EDILLIGEEKVYDLIEGMFQTMAH-LH-TRKINIGMDEAHLVGLGRYLIKHGFQ--NRSLLMCQHLERVLDIADKYGFNCQM--WSD--MFFKLMEETLRLKERVTLVYWDYY------QDS---------EEKYNRNFQNHHKISQDIAFAGGAWKWIG-FTPHFSRLVAIEANKACRKNQVKEVIVTGWGDNGSQFSVLPALQIWAELAYRNDLK--KVSEHFLVS-TGLDFDDMKDLAN | |||||||||||||
5 | 4uzsA | 0.09 | 0.08 | 0.88 | 1.17 | DEthreader | DGIFSWASPPMWLTQAHPEVLWKDGDTVWPGAREWRPTSPVFREYALNLCRRMAEHYNYVVAWHSNEYGCHNRFDSDDAMFWLDYKRFSSDALKELYIAERDVLESITPGLPLTTNFMSGGSMLDYDDWGAEVD--FVSNDHY-FTPGEAHFDE-----V--AY-AASLMDGISRK-EPWFQMEHSSAVNWRINYRAEPGSVVRDSLAQVAMGADAICYFQRQSKWSPHAGEQIFRDVCELGADLIAASLA---------------------- | |||||||||||||
6 | 6npsA | 0.09 | 0.08 | 0.83 | 1.17 | DEthreader | ASEPRYGEYKYLRGPDSIYGDA------------WNFINREITKFWEDGLKRTGH-F-EN-IITIMREADTKIMG----D--AT-LEDNINLLRDVIQTQNKLIKEVNNEVPRMLALYK--EVEPFYGGLSELEDVILMLCDDN-HG-N-L--------------RTL-PTDMRKHSGGYGMYYHFDYHSYEWINSSYLPKIWEQMTMAYDFGVRLWIVNVGDI---AT-QELPLSFFLDLAYDFDWKTDDYTKQWIEQQFAFQKDKVFELLN | |||||||||||||
7 | 4uzsA | 0.10 | 0.09 | 0.88 | 1.17 | DEthreader | VGIFSWTSPPMWLTQAHPEVLWKDRDTVWPGAREWRPTSPVFREYALNLCRRMAEHYKNVVAWHVNEYGCHNRFDYSDAMFWLDYKRFSSDALKELYIAERDVLESITPGLPLTTNFMVSGSMLDYDDWGAEV--DFVSNDHY-FTPGEAHFDE-------VAY-AASLMDGISRKEPWFQMEHSTSAVNW--NYRAEPGSVVRDSLAQVAMGADAICYFSMVPHAGESQIFRDVCELGADLGRLIAASLAH-------------------TG | |||||||||||||
8 | 1gqiA | 0.13 | 0.12 | 0.90 | 1.73 | HHsearch | NVNAPRVLS-DQFLQKIAALADAFYGIKMGDVDTADPLDPRVQQWWKTRAQKIYSYIPDFGGFLVKADSEGQPGPQGYGR-------DHAE----GANMLAAALKPFGGVVFWRAFVYHPDIEEFMPLDGKFADNVILQIKNGPIDFQPR--EP-------FSAL----FAGMSRTMMEFQITEYFGFATH---LAYQGPLFEESLKNTRHTGMAGVINPGTDRNTGHPFVQSSWYAFGRMAWDHQISAATAADEWLRMTFSNQPAFIEPVKQ | |||||||||||||
9 | 6yhhA | 0.11 | 0.10 | 0.88 | 1.17 | DEthreader | DHLVDWIHLILAILTAYPEIGSK--VTYRIEFPTLDPSNPKTYKILSELFDEVCPLFP-GAYFHIGGDENEGKDWNPKIQEFKKNLKTNHELQTYFTMQLAPMLK-KHG-KQLMGWEE----I--LTK-DLSKE-AIVHSWR--GPNE-----------G-MVA-GQ-SLVDAVKKGYKTVLSNGFYID--L--MYPVASHYLNDPMPKALEKILGGEATMWTLATFDSRVWPRTAAIAERLWSAEITDVNMRKRLESSHIKNTNVCPDSSVE | |||||||||||||
10 | 6hzeA | 0.09 | 0.07 | 0.86 | 1.17 | DEthreader | LWNGHPFAVSKPFADHYG---------IKT-QDRNRPITPLISDYTRKSVAAFIEKYPNV-GLLVCLGE--AIG--------T---YEEDVEWFTTIIPGIKDGLKVRDEPPVLVRAH---DTDCKMVDAALYKNLYTMHKYNGSSLTTY--EPR--------GPWAKIHKDLSSLGSVHISNVHIL-ANLEPWRWSSPDFIQKSVKAMHSHGANALHIYPQATADEQYRDWAWYKAWGRYAWKADRREIKYWDKQFGDFYGIPADNIRIAYE | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |