Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60
| | | |
| Seq | PKDNLKKNKKEMGQVDLIEEHSTLEKMINGPSNGSGDELGKFQCTPTERTQKVTYQGDGNNQETVLNGV |
1 | 2pffB | 0.16 | 0.10 | 0.62 | 1.22 | MRFsearch | | -----------------------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGQGSQE--- |
2 | 5u0p2 | 0.16 | 0.14 | 0.93 | 1.13 | SPARKS-K | | TRDELKHKLLDLNQPSLLKLLHPETGTVNSHLKSSNDTENNETKSINGKSAKEPHHSEHDNDNF----- |
3 | 2f40A | 0.12 | 0.04 | 0.38 | 0.70 | DisCoVER | | -------------------SKWIKFTTNL-----------------------VFINPYAKVAEVVTLQ- |
4 | 6dc6A2 | 0.08 | 0.07 | 0.88 | 0.83 | DEthreader | | ---PIATLNFPNAIEHTLQWAREFEGQPNVLEAQSLVLQRTWAAFQTPIDF-EKDDD--SNFHFIAA-- |
5 | 5jscA3 | 0.07 | 0.07 | 1.00 | 0.54 | CEthreader | | SAREDGDAYVLDGDKTWISNGGIADFYVVFARTGEAGISAFVVDADTPGLEIAERIAPHPLARLHFAGA |
6 | 2zkrr | 0.09 | 0.09 | 0.93 | 0.58 | EigenThreader | | LDPENPTRGSNLRVHFKNT--RETAQAIKGMH---IRKATKYLKDVTLQKQCVPFKQWTQGRWPSAEFL |
7 | 2jkrM3 | 0.14 | 0.09 | 0.62 | 0.20 | HHpred | | RREGIKYRRNEL-FLDVLESVNLL---MSPQGQVLSAHVSYLSGMPE---------------------- |
8 | 2pffA | 0.15 | 0.10 | 0.67 | 0.67 | MRFsearch | | -----------------------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGKYVLITGA |
9 | 7c9r9 | 0.10 | 0.10 | 0.97 | 0.23 | FFAS-3D | | PRRTLIFIVAFQIMLGILIHMIVLGSDLNWHNDGIPRFYSPRPVDVAVGPAGIPLEIPGSPMPQARN-- |
10 | 5yfpE1 | 0.03 | 0.03 | 0.94 | 1.09 | SPARKS-K | | KLLKTDNFLGGLTVNEFVQELS----KDHRNDVLIDANTKNLPTNEKDQDAIREAIWKQLDPKPYIRTF |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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