Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60
| | | |
| Seq | GGGSSISSVLKDPDSNPYSLLDNTETDQTADTDASDSHHNTNRRRRSRRRRTDEDATLMDGMTESDNASVSENGI |
1 | 2pffB | 0.03 | 0.01 | 0.44 | 1.33 | MRFsearch | | ---------------DDYGFKQGGGGGGGGGGGGGGGGGGGGQGSQEQ--------------------------- |
2 | 3hgfC | 0.08 | 0.08 | 0.96 | 1.05 | SPARKS-K | | ---KKIENIVTKIDKNEIAEIEKDKTSLEEVKNINMSYGKSLNKLFLEKIKKKSEKSMEKYIKDLDEIKEQSPKA |
3 | 1im0A | 0.15 | 0.15 | 0.97 | 0.49 | CEthreader | | YTQKSWWQLSNSEESSPFR--ETNYEPQLFLGFATDYRFAGWTLRDVEMGYNHDARLYTRLMAENGNWLVEVKPW |
4 | 6ppbk | 0.08 | 0.08 | 1.00 | 0.58 | EigenThreader | | GSNLSLTYLSLWRDATNYYVCVTLRQRVASEASAWIRAATSPACWMDVLGLWVSGSLVACVIVTPALEAWVLPGG |
5 | 3lm4D1 | 0.17 | 0.11 | 0.61 | 0.24 | HHpred | | --GYGKTFEYQSPDGHNLQLLWEAEKYVA--PPELRSKI-LTRPSKPLQGI------------------------ |
6 | 2v4jA3 | 0.32 | 0.16 | 0.51 | 0.75 | MRFsearch | | -----VPQHVKEPRTNPYIFFKEEEVPGGWDRD------ITEYRKRHLR-------------------------- |
7 | 1dgi1 | 0.19 | 0.13 | 0.72 | 0.24 | FFAS-3D | | -AATSRDALPNTEASGPTHALTAVETGATNPLVPSDTVQTRHVVQHRSRSESSIE-------------------- |
8 | 5jcss | 0.05 | 0.05 | 1.00 | 1.01 | SPARKS-K | | GVEIYIDELHSRSTAFDRLTLGFELGENIDFVSIDDGIKKEPDMSIPLKHYVPSYLSRPCIFAQVHDILLLSDEE |
9 | 1t92A | 0.32 | 0.09 | 0.29 | 0.65 | CNFpred | | PEGGYIRRLPQDPWGSDYQLLS----------------------------------------------------- |
10 | 5znmA | 0.06 | 0.04 | 0.71 | 0.67 | DEthreader | | ------KHAFILKFDAIEEHLSDKDTVEKG-TYRREK------G-SKVYFNPN-TMNVVIIKSN------TGEL- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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