>PF16094 (287 residues) MATFFGEVVAAPSRAGVDDEEEAAVEREETPEDREIRRELEKKREVHILWSSKLSASTGS FTDEQFPCSKFILAIGHNAVAFLSSFVLNSGCWEAVGSVKLWNEWCRTSNTTSVLPTDAF CLFYKLISDPTVLLCQCNCYVAEDQQFQWLEKVFGCMREEDLQVTILSTCPVTDYKTPES TLTLPSPFLKALKTKEFKEIVCCPLLEQPNIVQGLPAAVLSYCQVWQIPAVLYQCYTDVI KLDTVTIEAFKPVLSSKNLKSLVKDMSKSTEILKKLVTTNEIHNNIY |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 | | | | | | | | | | | | | | | |||||||||||||
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Seq | MATFFGEVVAAPSRAGVDDEEEAAVEREETPEDREIRRELEKKREVHILWSSKLSASTGSFTDEQFPCSKFILAIGHNAVAFLSSFVLNSGCWEAVGSVKLWNEWCRTSNTTSVLPTDAFCLFYKLISDPTVLLCQCNCYVAEDQQFQWLEKVFGCMREEDLQVTILSTCPVTDYKTPESTLTLPSPFLKALKTKEFKEIVCCPLLEQPNIVQGLPAAVLSYCQVWQIPAVLYQCYTDVIKLDTVTIEAFKPVLSSKNLKSLVKDMSKSTEILKKLVTTNEIHNNIY | |||||||||||||||||||
1 | 3vr0A | 0.12 | 0.08 | 0.72 | 1.00 | DEthreader | ------------------------------------------MKETTIVVY---E-----R--PDIYDPIFIEGLPLVGKLAAEHLIQELK-AKKFAELYSPHFMHQV-------VELMKNEFYYWKSPRDLIIVTGDTQVPSYGHFEVAGKMLDFVQEGTREIITMGGYQVP--------EIQGEPRVLAAVTHDLIEKLVIWREDEGGAIVGAAGLLLGIGKLRGMFGISLLGESLGIVDAKAAKAVLSAVTKI--LGL--EID--M-TALDERAKETEIL---- | |||||||||||||
2 | 3vr0A | 0.11 | 0.09 | 0.76 | 1.47 | MAPalign | ------------------------------------------MKETTIVVY--E--------RPDIYDPIFIEGLILVGKLAAEH-LIQELKAKKFAELYSPFMQVLIRKNSVVE--LMKNEFYYWDEHRDLIIVTGDTQVDSYGHFEVAGKMLDFVQEFGTEIITMGGYQVPEI--------QGEPRVLAAVTHYYKSKLEVIWRDEGGAIVGAAGLLLGIGKLRGMFGISLLGESLGYIVDAKAAKAVLSAVT--KILGLEIDMTALDERAKETEEILRKV---- | |||||||||||||
3 | 3gaaA | 0.11 | 0.09 | 0.80 | 1.18 | CEthreader | ---------------------------------------------MIMVNKKASESQVMELEKRNYNNPVVLCGFAGPTGVLAASYIVETLGMHQVAHLISQHIPPVA--VFVGGKLRHPFRIYANNS-NTVLVAMCEVPISSAHIYEISNTLMNWIDVGASEIVIMEGSPANG--------IPEERPVFAVAEKPKLDKFKKAGIQPADIIAGMGGGILNECLVRKITGLSFITPTSVDIPDPGAVLSIIEAINKAYTDLLEEQVKALDEQIKKIEEQYKELQEKQ | |||||||||||||
4 | 4g4sO | 0.11 | 0.07 | 0.64 | 1.63 | HHsearch | ---------------------------------------LEVCPVPKVEF-----------------YSTAVITTKIMNPLFPKNLLQ----LTSIGEIKTTL---------------FSFPIYSFG--KTLLFSMEENFISPIFGNMISRSIISQLAQFSPDIIVIGTS-------DKI------ASMKVM-------TENECTLQPPEFITGFIGSVLTQLIVGGLKFKCLVAPSEGPNLSLSDMGSLVDLCGQWGFE-----PSRYCYRLWRCDSAAGAQSGLY | |||||||||||||
5 | 3wz2A | 0.10 | 0.07 | 0.70 | 1.00 | DEthreader | --------------------------------------------PVNLVL-------------PEVENAIFIEGYPLVGHIAANFLAKELD-MDLIGYVDSLFIP---------PMSLPPLRFYGK--N-NIIIAIADIFLPPTLVNEIAKEIVNYLKKNAEKVISLAGMGIG--------FFKDTFEVWGIGGSEEKESLGVKILKY-GSITGMSGKLLWEASRAGLKSYVLLGETFDRPDPRAAANVVEVLNKM--LGL--NVS--VEPLLKE-AEMIEEQLRMH | |||||||||||||
6 | 3vr0A | 0.11 | 0.08 | 0.71 | 1.00 | DEthreader | ------------------------------------------MKETTIVVY---E-----R--PDIYDPIFIEGLPGLGKLAAEHLIQELK-AKKFAELYSPFMHQVLI------VELMKNEFYYWKSPRDLIIVTGDTQVDSYGHFEVAGKMLDFVQEGTREIITMGGYQVP----------EIQPRVLAAVTEDLIEYYKVIWREDGGAIVGAAGLLLGIGKLRGMFGISLLGESLGIVDAKAAKAVLSAVTK---I--LGL----EI-DM-TALDERAKET--I | |||||||||||||
7 | 3vr0A | 0.12 | 0.09 | 0.76 | 0.89 | HHpred | -------------------------------------------KETTIVVYE----------RPDIYDPIFIEGLPGIGGKLAAEHLIQELKAKKFAELYSPHFMHQVLIRKNSVVELMKNEFYYWKSHRDLIIVTGDTQVDSYGHFEVAGKMLDFVQEGTREIITMGGYQVPEI-Q-------GEPRVLAAVTHEDLISKEVIWREEGGAIVGAAGLLLGIGKLRGMFGISLLGESLGYIVDAKAAKAVLSAVTKIGLEALDERAKETEEILRKVEE--------- | |||||||||||||
8 | 3vr0A | 0.12 | 0.09 | 0.71 | 0.94 | DisCoVER | ------------------------------------------MKETTIVVY--ER--P--D----IYDPIFIEGLPGVGKLAAEHLIQE-LKAKKFAELYSPHFMVLIRKNSVVEL--MKNEFYYWKSHRDLIIVTGDTQVDSYGHFEVAGKMLDFVEFGTREIITMGGYQVP----------EIEPRVLAAVTHELIEYYKLCSV-EVIWRVGAAGLLLGIGKLRGMFGISLLGESLGYIVDAKAAKAVLSAV-TKIL-GLE-----I--DMTALDE------RA- | |||||||||||||
9 | 3gaaA | 0.13 | 0.09 | 0.71 | 0.83 | MRFsearch | --------------------------------------------ESQVMELEKR----------NYNNPVVLCGFAGPTGVLAASYIVETLGMHQVAHLISQPVAVFV-------KLRHPFRIYANN-SNTVLVAMCEVPISSAHIYEISNTLMNWIDQVASEIVIMEGSPANGI--------PEERPVFAVAEKP-----KLDKFKKSAIIAGMGGGILNECLVRKITGLSFITPTSVDIPDPGAVLSIIEAINKAKTDLLEEQVKALDEQIKKIEEQ-------- | |||||||||||||
10 | 3gaaA | 0.13 | 0.10 | 0.78 | 0.79 | SPARKS-K | ---------------------------------------------MIMVNKKASESQVMELEKRNYNNPVVLCGFTPTGVLAASYIVETLG-MHQVAHLHIPPVAVFVGGKLRHP-----FRIYAN-NSNTVLVAMCEVPISSAHIYEISNTLMNWIDQGASEIVIMEGSPAN-----GIPEERP---VFAVAEKPKLDKAGIQPADSA-IIAGMGGGILNECLVRKITGLSFITPTSVDIPDPGAVLSIIEAINKAYLEEQVKALEQIKKIEEQYKELQEKQKE-- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |