>PF16091 (238 residues) LYDVVARVATTSIGQFVYKRVDNLLWTMEKTARWSLPQPSPVGGAVSSKKSSPEADEDIG SNISGPPLIRPLPWLLFLPALIVLRMVRSTLSLGARFIGRDPVLPSSMVGFLQNKRRKLR ALKYRGQRLQRIAKVEQEADPKQVTWLQRIILPLRMVICTRPYRTIDTNSDVAHAVIFRK DRPASSAGQKRVESKKRNLNQREAESEEEECSDEYSFEDAGCKELLDKYANEEDSSFN |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | LYDVVARVATTSIGQFVYKRVDNLLWTMEKTARWSLPQPSPVGGAVSSKKSSPEADEDIGSNISGPPLIRPLPWLLFLPALIVLRMVRSTLSLGARFIGRDPVLPSSMVGFLQNKRRKLRALKYRGQRLQRIAKVEQEADPKQVTWLQRIILPLRMVICTRPYRTIDTNSDVAHAVIFRKDRPASSAGQKRVESKKRNLNQREAESEEEECSDEYSFEDAGCKELLDKYANEEDSSFN | |||||||||||||||||||
1 | 4ihqA2 | 0.04 | 0.03 | 0.69 | 0.62 | DisCoVER | ------SITQLIMFGT--LS-SMMAAYLFVCGESGKTTTLNIVTIEDTPELTVWVAEVTYILVGAIMATFHAA--NITTLIQRL------------------------------TGYPI-----------------------PKS---YINN-LNIALFQTALYDKKGNLIRRVVEVDEIIDIDPVDVVYIPAFTYDSVQDKMLFA----GKGSSYLIERNIGLLYDELQMRSRFLN- | |||||||||||||
2 | 6at7B | 0.05 | 0.03 | 0.74 | 0.67 | DEthreader | GAAAELSSHE-A-MYDANVLAVLSEVLSAIFCEGKPEYTDHL------------------THKLKHIAMELMAQDR-YALRTSPQWLGPQI-EV------------------------LR-AATKSIEREVSGPIGVMDARLAIANIGKLMFAQFSELVNLTSNLANPSDYGFAQAILRH-E-ANRIASFPLYRF---------VREELGCVFLTG-SPGEECTVFNGINQGKL---- | |||||||||||||
3 | 1c3cA | 0.11 | 0.11 | 1.00 | 0.48 | CEthreader | HAEPTSFGLKVLGWYSEMKRNVQRLERAIEEVSYGKISGAVGNYANVPPEVEEKALSYLGLKPESTQVVPRDRHAFYLSTLAIVAAGIERIAVEIRHLQRTEVLTCERLTGLSRMMRAYVDPSLENIALERDISHSSVERYVFPDATQTLYYMIVTATNVVRNMTKGLVFSQRVLLKLIEKGLTRKEAYDIVQRNALKTWNSEKHFLEYLLEDEEVKKLVTKEELEELFDISYYLKHV | |||||||||||||
4 | 4akkA | 0.07 | 0.06 | 0.95 | 0.57 | EigenThreader | FARARRLQKQQLHQLAQQGTLAGQISALVHMLQCERGASNIWLCSGGRL---------YAAECRAGAALVDEQLTRFYAALEPARDQLAALRKRVRDREIAAEEATGQFSRIIRHLLNIVPQLNDSIALGALGFARGQFSDELRQQLVDRIDGQQPCFDSFQALAQRGVEELLIV---DLLNAADALLEGSQAHELQQLSGQLASKAKSVLMTYQGMQEEQAWQALRKMAMDKNQRMV | |||||||||||||
5 | 4fnvA1 | 0.13 | 0.08 | 0.56 | 0.27 | HHpred | -----------TISEAEQAKADYALYEDKGGINWEYPKDSDEYQLHRHQWVSGDEKENNPK---PTTGPNTTSWW---QLQVSTRIG-DQVQLLEYFKNSVNFTPEWLSTFLVEFAEQADFLVDY-------PYE-SG---GNILISQANAL-ATAGTLMPEFK-------------------------------------------------------------------------- | |||||||||||||
6 | 2v0oA | 0.11 | 0.06 | 0.59 | 0.43 | MRFsearch | --GFDVLYHNMKHGQISTKELADFVRSMTKLAKSA--------------------------------QLGTFAPVWDVFKTSTEKLANCHLDLVRKLQ----ELIKEVQKYGEEQVKSHKKTKEEVAGTLEAVQTIQSIALAKADFEQKMTETAQKFQDI------------------------------------------------------EETHLIHIKEIIGSLSNA------ | |||||||||||||
7 | 6c14B | 0.08 | 0.05 | 0.65 | 0.68 | FFAS-3D | -TNYVRNSRAVGVMWGTLTICFSVLVMALFQPYW-IGDSVQAGYFGLFSYCVGNVLSSELICKGGPLDFSSIPAFKTAMFFVALAMFLIIGSIICFSLF-FVCNTATVYKICAWMQLAAATGLMIGCLVYPDGWGHCTIRWAFMLAILSIGDALILSF-------------------------------------------------------------------------------- | |||||||||||||
8 | 5yfpA1 | 0.10 | 0.10 | 0.96 | 0.68 | SPARKS-K | NDECHRIIPTLSLFLMEMSNFSNDIENVESQ------DNGLQVESANKKLLWNTLDELLKTVSLDEISLNQLLLPWMENQLNLLLKAFQAIDGNEVEYNLREISGLKQRLQFYEKVTKIFLNRIVEEMQKKFSNIRGQDIHDQMIRILTTLLIFSPLILF--CKEISQKSYQAIVENWDEKMNELSLSQLLNEWDTFR-KERKTNDINPVFKNSFSLLTECLQTMRQECIVYQNEVFF | |||||||||||||
9 | 6f34A | 0.06 | 0.03 | 0.43 | 0.64 | CNFpred | AFDLTMLGIGAIIGTGIFVLTGVAAAEHAGP---------------------------------------ALVLSFILSGLACVFAALCYAEFASTVPV---GSAYTYSYATFGELIAWILGWDLILEY--------------GVASSAVAVGWSGYFQ------------------------------------------------------------------------------- | |||||||||||||
10 | 7jsnA | 0.04 | 0.03 | 0.76 | 0.67 | DEthreader | ESEIIFDLLRDFKCVFNVMKLCDRMSNHVV-VPNTE-E--------------------------DEHFCDDEYQTKN-VNKV-DG------------------FTENDEEILLKLN-AN--MK-HLSLHEDEMDETLMESLTQFLGWSVLNPDT-YELMNKLENRKDIFQDMVKYHVKCDNEEITIEEEEEELEIL-D--ELKVVDFHIPQEALVRFMYSLS-KGYRRITYN-GEEQL | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |