Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | QIRKWYYLIGALVTALVPILVTSGVVSDTQGNAWINAVVAIGGVLGAAGLGTAGVVLGKQIKGAPGAAADKAVTSLQDIQAQLNSTAQAAQDQLAAATQVAVDSITKIQATVGNVVGPQVSLGPLAAEVIKSV |
1 | 6djlB | 0.09 | 0.08 | 0.87 | 1.00 | DEthreader | | SKPYWEARRVARQAQLEAQKATQDFQRAATKTRSELVHKETAARYNAAMGRMRQLE-KKLKR-A--KSPYFELKAKYYVQLEQLKKTVDDLQAKLTLAKGEYKMALKNLEMISDE-IHERR------------ |
2 | 5j5kA | 0.08 | 0.07 | 0.86 | 0.83 | DisCoVER | | DAATILSDLSTIKTDINTLTQHFFTGDLLQALAAQAVEQQLESDID-QATADA------------KATSALSAADSTSVTNALLGLK-PD---IVTSLDAIVAKK-PQVDSAGVGSLVLDLLQSKTDALSGL- |
3 | 5yd1A | 0.03 | 0.03 | 0.87 | 0.83 | DEthreader | | -GLDSVVYLRIYLGLKIFAIA--MLAWAVLVHMAYAFTIWTCYMLMEYETVANMRLQFSE---------RDISVSFLERRSASRYYIFNLVFLLLLVSLLMGLL-ASAAPF---LIALPVITIGFHR-CKFEF |
4 | 5jsiA | 0.07 | 0.07 | 1.00 | 0.48 | CEthreader | | ELTYRLFMVATVGMLAGTVFLLASSREVKPEHRRGVYISALVCGIAWYHYQKMGASWESGSYDTGLRYVDWVLTVPLMFVEVLAVTRKGAAYNEAVRNWGIAATVMIGAGYYGETSAAGSNEYWTGFVIAMAT |
5 | 6grjG | 0.14 | 0.14 | 1.00 | 0.73 | EigenThreader | | DKVNAAIDGAIAGIVAGGLLVIGGAFVTAIGAVVIGGVAGAGGITAGAIVLHNSLGARQDLYQKRSSLNSEVLIGYKGLQVQAQNAVTAATQSDLGSLITDLDKGDDIRQLWLTAADTTVKTVLTDVTTIKAQ |
6 | 1ciyA | 0.12 | 0.08 | 0.71 | 0.26 | HHpred | | ------YTPIDISLSLTQFLLSEFV-------PGAGFVLGLVDIIWG--------------IFG-----PSQWDAFVQIEQLINFARNQAISRLEGLSNLYQI----YAESFREWEA-DPTNPALREEMRIQ- |
7 | 6grjG | 0.13 | 0.11 | 0.85 | 0.32 | MRFsearch | | --AIAGIVAGGLLVIGGAFVTAIGAVADFVTTSTPVVIGGVAVAGAGGITAGAIVLH-------------NSLGARQDLYQKRSSLNSEIGNGYKGLQVQAQNAVTAATQSNA-----WDSLTSDLGSLITDL |
8 | 3e0sA1 | 0.11 | 0.11 | 0.92 | 0.74 | FFAS-3D | | ---EFLHDFRVAIRRSRSILRLLNGVDPEKTAWMLAGLRELGKRTNDLRDSDVYLLRREEYTS---LLPPSLRPALDPFFSDLEADKRLHHRQFCRYGREYSGFMTSLKEFIAEGELPDPETAPLAAE----- |
9 | 5e7xA | 0.11 | 0.11 | 0.95 | 0.71 | SPARKS-K | | DVNVFKKVLENIGNAVTQFNNDILAYTGGDANHLIHDGDAIIKATENGLQELGP------QPPLSLTEALALVGPVQGVNKLIMKTVDHLIGPLVGVKASLQKQAHAAVTLSELVSSKVPPLAPISKQLSDQV |
10 | 5cwoA | 0.13 | 0.11 | 0.87 | 0.71 | CNFpred | | ELVEWVARAAKVAAEVIKVAIQAEKENRDLFRAALELVRAVIEAIEEAVNPELVEWVA-----------RAAKVAAEVIKVAIQAEKEGNRDLFRAALELVRAVIEAIEEAVKQG------NPELVERVARLA |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|