>PF16072 (293 residues) ATYHSPGALPAGATYHPSGYAPAGASYHPAGQIPPGASYYPSGGVPHGATYYPQAPVAAV PAGATYLPAGAGLPPGATYYPQAPKSSSGLGLGTGLVAGALGGAILGHVLTPTQTRVVEH APMSGGYGGGGGGGSNGGGEDKIIIINNGPPGSVTTTDAGSGTTVINAGGAQPAAPAAPA YQPAPAGAPAAAPAAAPAPVPSAPQTPLAPLTPSAAEGAIAATAAGAGLANAAAPAAAAP PPVDPNAPAAAAAPPAPGGIICVPVRVPEPDPKDPTKTIEVEKIACYPAPPPE |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 | | | | | | | | | | | | | | | |||||||||||||
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Seq | ATYHSPGALPAGATYHPSGYAPAGASYHPAGQIPPGASYYPSGGVPHGATYYPQAPVAAVPAGATYLPAGAGLPPGATYYPQAPKSSSGLGLGTGLVAGALGGAILGHVLTPTQTRVVEHAPMSGGYGGGGGGGSNGGGEDKIIIINNGPPGSVTTTDAGSGTTVINAGGAQPAAPAAPAYQPAPAGAPAAAPAAAPAPVPSAPQTPLAPLTPSAAEGAIAATAAGAGLANAAAPAAAAPPPVDPNAPAAAAAPPAPGGIICVPVRVPEPDPKDPTKTIEVEKIACYPAPPPE | |||||||||||||||||||
1 | 1k3vA | 0.07 | 0.06 | 0.84 | 0.65 | DisCoVER | TGTFNNQTEFLVRITAH----ASRLIHLNMPEHEPWSLIDANAWGVWFNDWSNMTEINLVSFEQEIFNVVSLMVALTPAAETLGFYPWLPTKPTQIHLLRTGDEFSTGIYHFDTKPLKLTHSWQTNRSLGAQVGYNTPYMNLTPIV--------PTADTEPNGAIMDYQHGHLTTNPQSKCGRAPLNTYGLTALNNTWDPFVCKNNPPGQLFV------------------------------KIAPIITYSNFWWKGTL-T-FTAKMRNIPTNIGGIRMF---PEYSQLIP- | |||||||||||||
2 | 3bicA | 0.07 | 0.05 | 0.66 | 0.67 | DEthreader | ----------AFTHRG----YDSDNPRVRG--DV---MAGVAIDTVEDTGAVIPV-----------IQNDILKEFRNT---------------------ISISGYHMQEAGADAI-GMN-F--------YMEIAKRAGRLAHCQTSGWLEQPNRTAAMAVFGTLHTNSFDASIAT-IISGIDPWGGSECLNDVAAKLINEGMAKVAGPKLIEAARQARIGSEVIV-GVNKY-QLEKE-------------DNTVRM--DGHDRG----------------------STLAAHL | |||||||||||||
3 | 4n2zA | 0.10 | 0.10 | 1.00 | 0.57 | CEthreader | WQWTSTGPLVGPKNDGRGIAGIKDPTIILINGTHHVFASTAQSAGY-NLVYFTFADWADAPNATFYYLDQAPLGTGYRAAPQVFWFAPHKLWYLVYQNGNAAYSTNPDINNPKGWTAPKVFYPDGMPKIIEQNIGEGYWVDMWVICDSASCHLFSSDDNGQLYRSETMSQPVIAMQDNRNDLFEAACVEAIGTDGHRWFRSWTADSIRGPWQGLANTEQNPWARSNNVQFDGDVWTKSISHGEIIRDGTVDEKLLIDPCNIRFMYQGMDPSAGGEYNALPWRLGFIAHNNPAC | |||||||||||||
4 | 2vn4A | 0.08 | 0.07 | 0.94 | 0.55 | EigenThreader | VGPDGCRAFGTSAGAVIASQRRIEQYITAQVTLQGLSNPSGSLADGSGLGEPRPQRWPIVRNDLNYVAQYWNQTSGGYVDDPNLGCDAGTFQPCSDKALSNLKVVVDSFRSIYGVNKG---IPAGAAVAIGRYAEDVYYNGNPWYVPADGSLAEQFDRNSGT-PLSALHLTWSYASFLTATARRAGIVPPSWANSSASTIPSTCSGASVVGSYSRPTAT--------------SFPPSQTPKPGVPSGTPYTPSTQFGQTVKVAGNAALGNWSTSAAVALEYKYINVGQDGSV | |||||||||||||
5 | 5mmmK | 0.15 | 0.03 | 0.22 | 0.30 | HHpred | ------------------------------------------------------------------------DIWNTTWYPKSAPDVDATDLILGRMASTIAIHIRGK-----NLASYTPSVD---------------MGAFVIVVNADKV--AVSGKK-------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
6 | 3lmlA1 | 0.12 | 0.05 | 0.40 | 0.70 | MRFsearch | ---------------------------------------------------------------------------DTIAFPVS--------SSDVALKTSFVSFVKRRDEQ----------------------------GVKIKGVVANYEGIINVRN----GVTLRD----------------------------------------------GTILEPHQVVAWVAGADASASLKSNTFVKYDGAIDATPEEALQNGEFVLTFDA-------RDKAVYVEQDL-------- | |||||||||||||
7 | 2xd8A | 0.11 | 0.11 | 0.96 | 0.45 | FFAS-3D | ----------ANANQVALGRSNLSTGTGYGGATDKYALYLKLKGFQHETIARDLVTKRTLKNGKSLQMTSSFHTPGTPILGNADKAPPVAEKTAEKYDRLIFRSITRGARSASPVSATNFVEPGGTQIRVGSGTNESDAQGRCAVLNPRQYYALIQDIGSNGLVNRDVQGSAL-QSGNGVIEIAGIHIYKSMNIPFLGKYGVKYGGTTGETSPGNLGSHIGPTPENANATGGVNNDYGTNAELGAKSCGLIFQKEAAGVVEAIGPQVQVTSVIYQGDVILGRMA--MGADYPA | |||||||||||||
8 | 4k0mC | 0.28 | 0.16 | 0.58 | 0.91 | SPARKS-K | -------------------------------------------------------------------------------------------------KVYTIDEAARTAKFDETVEVHAKLGSDQNVRGTVSLPHGLGKQVRVLAIAKGEKDYVGGEEIIQAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA-------------------------- | |||||||||||||
9 | 3wfzA | 0.09 | 0.02 | 0.26 | 0.50 | CNFpred | ----------------------------------------------------------------ATNDY----GKGRGVYISGLPYS-------AANARLLERVLFYASHNE---DKYAAWSSSN--------------PECEVAHFPEQGLYCVINNTDPQKTTVTL----------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
10 | 6em8A | 0.05 | 0.03 | 0.68 | 0.67 | DEthreader | --TER-QRVLHAHLGYT-PRAKKVILSMDARHHNFVGHIGLNEGVA---------------------------------LDLN-I-T--KARA-QVVKALKSNN------T--AKDGTL-----------------------DPVIGRDKEIIGEPGVG--A-GDEPSVDTNFLDKAIDLIEASSKVRLKSHTTPNNLKEQIEKEKAVEFENAALRQTLEYEAKNEWK---QGM--STSLSEDIAIALTKIMFGDDDAMISVIILLQVL----------HLTDVIII----KN | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |