>PF16063 (261 residues) TNLLRLQLRKPNHWNWELSTSRSCNNIALPRILLYDNTGALLLDADGLSEQTYRPVNVPD CRRKLSTGSHNQRLQRARLPGDFNGLCIGEAAPSVTPTPVFPFSRQQIAGSCIDLSTHEL PNWQPHGMDGSRRSSSLRGARLEIQDHRLDQPQQLTQKSAYPTPPSTSTMTTTANSSSSG PREKRRYRRSHSSGQRSILERFSMTRGRHSSPEYIQEQVLEHKPRYYLCSSKAGTLVIQD ESFNRVRQRRRRQRNSSTENV |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 | | | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | TNLLRLQLRKPNHWNWELSTSRSCNNIALPRILLYDNTGALLLDADGLSEQTYRPVNVPDCRRKLSTGSHNQRLQRARLPGDFNGLCIGEAAPSVTPTPVFPFSRQQIAGSCIDLSTHELPNWQPHGMDGSRRSSSLRGARLEIQDHRLDQPQQLTQKSAYPTPPSTSTMTTTANSSSSGPREKRRYRRSHSSGQRSILERFSMTRGRHSSPEYIQEQVLEHKPRYYLCSSKAGTLVIQDESFNRVRQRRRRQRNSSTENV | |||||||||||||||||||
1 | 3ghpA | 0.04 | 0.02 | 0.57 | 0.71 | DisCoVER | ----------A-SYITMGYKNAAEVGEIIKATVKINK---------------------------------------------ITNFSGYQVNIKYLQAVNPGVAYTNSSLPTSGELLV------------------SEDYGPIVQGVHKISEGILNLSRSYTYEEGTLAVVGFK---------------VLQ----KKATTVVF-E-DSETMPNG-------ITGTTLFNW-YGNRIQSGYFV--IQ--PG----EINSA- | |||||||||||||
2 | 3a9gA | 0.10 | 0.10 | 0.99 | 0.61 | CEthreader | AGLLGLALFPKKSWVYLYASYFAEGGHIRNRVIRGRLDGKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNPFPNSPIWSYGHRNPQGIDWH---RASGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDPVIDTGSETWAPSGASFVHGDMFPGLRGWLLIACLRGSMLAARKISTFFKNVFGRLRDVVIDDDGGILISTSNRDGRGSLRAGDDKILKIVS | |||||||||||||
3 | 3al8B | 0.07 | 0.06 | 0.86 | 0.58 | EigenThreader | NRDWTFNHLRTGAVYVGAINIVQPCSEVNVNKLLIISENRLLACGYQGVCKLLLFILVEPSHKKEHYLSS--------VNKTGTMYGVIVRSEGEDG-------------KLFIGTAVDGKQD------------YFPTLSSRK-LPRDPESSAMLDYELHKFHSYPGEALAQAFNISSDEDVLFAIFSKGQHPPDDSALCAFPIRAINLQIKERLQSCYSPIQLYLYVMS--ERQVTRVPVGECLSSGGWCALHNMDKC- | |||||||||||||
4 | 5i2cA | 0.13 | 0.09 | 0.71 | 0.34 | HHpred | -------------------TPEDYTLMVLPPLQVAEAWLVLNVSS--H-------QAAGVTKIRSVIAPLAEHVIHT-LAQEFDGEPVP-VTRHGPSPTVHPIQSPQNRFCVLTLDPETLPAIAT----------------------------TLIDVLFYSHSTKEA---ASSSPEPSSI----TFFFSLIEGYAETQKKFPSDLT-LWRMVLFDECGIADISAYYISTFNFDHALVPEDGIGSVIELQR---------- | |||||||||||||
5 | 2diyA | 0.12 | 0.05 | 0.38 | 0.40 | MRFsearch | ------------------------------------------------------------VEEVGSAGQFEELLRLKA-----------------------------KSLLVVHFWAP----WAPQCAQMAELAKELPQVSFVKLEAE-------------------------------------------------------------GVPEVSEKYEISSVPTFLFFKN-SQKIDRLDPELTKKVQRHASS-------- | |||||||||||||
6 | 2ftcC | 0.10 | 0.07 | 0.67 | 0.35 | FFAS-3D | ------------------------------------RVG--LIALKLGMMPLWTK------------------------DGQKHVVTLLQVQDC---HVLKYTSKENCNGKMATLSVGGKTVSRFRKATSILEFYRELGLIFNITDNAAIKPGTPLYAAHFRPGQYVDVTAKTIGKGFQGVMKRWGFKGQPATHGQTKTHRRRVWPGTKMPGKMGNIYRTEYGLKVWRINTKHNIIYVN---------------------- | |||||||||||||
7 | 6ybt2 | 0.08 | 0.07 | 0.91 | 0.77 | SPARKS-K | --MKPILLQGHERSITQIKYNREGDLLFTPIVNVWYHTGAVWCVDDTKSCRLWDCETGKQLALLKTNSAVRTCGFDFGGNIIMTFVSFFDLRDPSQIDNNEPYPCNDSKITSAVWGPLGHESGELVLVNVKEHSRQINDIQLSRDMTMDSTTLEHQKTFRTERPVNSAALSPNYDHVVLGGGQEAMDVTTTSTRIGKFEARFHLAFEEEFGRVKGHFGPINPDGKSYSSGGEDGYVRIH---------------------- | |||||||||||||
8 | 2vecA | 0.11 | 0.03 | 0.29 | 0.58 | CNFpred | VWLHHIVLDK--GESANFQLH-----GPRAYLQSIHG--KFHALTHHEEKAALTCGDGAFIRDE-------------------ANITLVADSPLR--------------ALLIDLPV------------------------------------------------------------------------------------------------------------------------------------------------ | |||||||||||||
9 | 1xmeA | 0.08 | 0.05 | 0.71 | 0.67 | DEthreader | ------QLTLHGVLNVFTQAQM---------AGLAAPLLFGAVFVLTWVS-------------AVLLPWSFGVEG----------ARTLFWWT----------------GHPIVYLLYAIYTIKLVSDPMARLAFFLSTVGFQFDPGI--DP-TWKMIHSVTLAVSLTAVALWILPWDNPAFVPVLFGGAGIVNASFHFQVASLTLMGLYISDARLGLAVLWFGM---------------GLLLLLFIYGLFSV--SRE-- | |||||||||||||
10 | 6fmlG | 0.11 | 0.11 | 0.99 | 0.64 | MUSTER | ATLMNLQFRKPDLFE-TSSPFFCGHFAETGSFLREGTNVALGYSTRSLVEYRLPRLIWCDGGRLDKPGPNLVAGFRSKYLNHMMNIWTPENIRSSLEGIENFTWLRFVDTSLQEAYRASHTDVFARAVDLASKQNRLGHMQIVYDEPEDKKWTPVHALFQICERENPKAVAEITTE-GVLRDLMNIARVKYRELGLCRLEKAARPRASAPPIEVVCDSRSAVIERENIMFHPAMRKALFGPTPSEIKEASFGPRPVTLYPP | |||||||||||||
|
|
References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |