>PF16057 (254 residues) YILLQDPQLHSLAYVKLHSLLQTSSAPRKDEACYLLGKLETPLRRSLEAKSETFSWLVPI IRTLMDQCYETLQLQLFLPSLPPTNGSPPFYEDFQLFCTTPEWRGFIEKHVQPTMAQFEM DTFARSHDHMSNFWNACYDAMMSSAQRREQEKAASRKMFQELVLEPVAKRSKAENARHSN VLKQANNHQSTVLKQWRSLCRLLTSPRSAWADRNPPEVRWKLSSAETYSRMRLKLVPNLN FDQHLEASALRDNL |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | | |||||||||||||
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Seq | YILLQDPQLHSLAYVKLHSLLQTSSAPRKDEACYLLGKLETPLRRSLEAKSETFSWLVPIIRTLMDQCYETLQLQLFLPSLPPTNGSPPFYEDFQLFCTTPEWRGFIEKHVQPTMAQFEMDTFARSHDHMSNFWNACYDAMMSSAQRREQEKAASRKMFQELVLEPVAKRSKAENARHSNVLKQANNHQSTVLKQWRSLCRLLTSPRSAWADRNPPEVRWKLSSAETYSRMRLKLVPNLNFDQHLEASALRDNL | |||||||||||||||||||
1 | 6w2qA | 0.06 | 0.04 | 0.60 | 0.57 | DisCoVER | AEAKSPPEDLKEAVRLAEEVVRE--RPGSEAAKKALEIIQEAAELLKKSDPEAIIAAARALLKIAATT----------GDNEAAKQAIEAA--SK--AAQLAE--------------------------------------------------------------------------------QRGDDELVCEALA--LL--IAAQVLLLKQQGTSDEVAEVARTISQLVCVRIVEIVLEINEIVRRVKSEVT- | |||||||||||||
2 | 1jkyA | 0.04 | 0.03 | 0.71 | 0.67 | DEthreader | YQLDT------------------DTGGLI---NMNINNLTALGADLVDSNRGIFNEFKKN-FK-YSISS-NYMIVDINER---------------------PALDNERLKWRIQLSLEIK-DV--QIIKEYIRI-DAKV---VPKSKIDTKIQEAQLNINQE-WNKALGL--PKY-TKLITFNGRFVFTIEQHSKLHGPSKG--VELRNDS----------LTSYGEFAEAFR----H-STDHERLKVQNAPTF | |||||||||||||
3 | 6xteA2 | 0.09 | 0.08 | 0.97 | 0.48 | CEthreader | LKFYFHDGVRVAAAESMPLLLECARVRGPEYLTQMWHFMCDALIKAIEPDSDVLSEIMHSFAKCIEVMGDGCLNNEHFEEL-------GGILKAKLEEHFKNQELRQVKRQDEDYDEQVEESLQDEDDNDVYILTKVSDILHSIFSSYKEKVLPWFEQLLPLIVNLIPHRPWPDRQWGLCIFDDVIEHSPASFKYAEYFLRPMLQYVCDNSPEVRQAAAYGLGVMAQYGGDNYRPFCTEALPLLVRVIQSADSK | |||||||||||||
4 | 6mzeE | 0.12 | 0.11 | 0.98 | 0.75 | EigenThreader | YIVDSNVVAQENAIIALHTLLEYINVSTSKLRLQWIPPLVEKG------LSSSRAATKAKATDCIMLLTQSDQTVNLMLPSLSNKLPRLVSSCVKCLATIIEEFNILLSEILEPKLSSNVRSETMNLILQIYKWELLQELLIQQRDLSRMFEKYVPAQDFQTRISKDRVEALEEIHNNVRVLANVIQKDQAVTIAANSVQLLCNSLRSNFTRSYGAIVLVPLLERTKESVNEAICSALCGFDDCLEETLNYMKH | |||||||||||||
5 | 2pffB | 0.17 | 0.15 | 0.84 | 0.47 | HHpred | -QGNTDDYFE-----ELRDLYQTYHVLVGDLIKFSAETLSELIRTTLDAPDKDYLLSIPLIGVIQLAHYVVTAKLLGFSYLKGATGHSQGLVTAVAIAETDSWESFFVS-VRKAITVLFFIGV------------RCYEAYPNTLENNE-GVSISNLTQEQV-QD-YVNKTNSPQSLYGLNLTLRKAKA----------------PSGLDQSRIPSERKLKFSNRFSDLINKAKDIQIPVYDTF-DGSDLRV-- | |||||||||||||
6 | 3icqT | 0.10 | 0.08 | 0.83 | 0.37 | MRFsearch | -IHNTNERVRPRAWYLFYRFVKSIKKSDFNSQLYLFETVGVLISSGNLTPEEQALYCDSLINALIGKANAALSSD------------LSALENIISVYCSLMAIGNFAKGFPAREEVAWLASFNKASDEIFLILDRIRGAVRFTSGRIINVVGPDMLPKVPQLISILLNSIMNELVDVLSFISQLIHTNRMLPTLLMRIFSSLSAAP-------------------------------QGTDDAVKQNDLRKSY | |||||||||||||
7 | 3ok8A | 0.12 | 0.09 | 0.76 | 0.95 | FFAS-3D | -----EMDQFYRSTMAIYKSIMEQFNPALENLVYLGNNYLRAFHALSEAAEVYFSAIQKIGEQALQ-----------------SSTSQILGEILVQMSDEVVVQTFHGDLLQHMEKNTKMQFIKDSCQHYEIEYRHRAANLEKCMSELWRMENRLHAQMQAFVSESKRAAELEEKRRYRFLAEKHLLLSNTFLQFLGRARGMLQNRVLLWKEQS---------------------------------------- | |||||||||||||
8 | 6xt4A | 0.09 | 0.07 | 0.81 | 0.76 | SPARKS-K | LAKSPDPEDLKEAVRLAEEVVRERP--GSNLAKKALEIILRAAEELAKLDPKALIAAVLAAIKVVREAKKALEIILRAAEELAKLPDPLALAAAVVAATIVVLTQELAKKALEIIERAAEELKDPLAQLLAIAAEALVIALKEMVKLTTLALLTSLLILILILLDLKEMLERLEVIVKVLKVIVKAIEASVLNQAISAINQILLALS----------------------------------------------- | |||||||||||||
9 | 4fgvA | 0.13 | 0.10 | 0.76 | 0.71 | CNFpred | RFLKAHWKFLKTVVNKLFEFMHESHEGVQDMACDTFIKIAKQCRRHFVALQ---SENEPFIEEIIRNIGKITC------DLTPQQ-VHTFYEACGYMVSAQQQERLLAELMAIPNAAWDEIIKAA-EPDTIKIIGNIMKTNVSACSSIGPYFFPQIGRLYNDMLQMYAATSQLISEAVAR-MPKVRGLRTIKKEILKLVETFVEK------------------------------------------------- | |||||||||||||
10 | 1g8xA | 0.07 | 0.05 | 0.69 | 0.83 | DEthreader | R--KYLKVKQ-DS--DL-------------FKLT--D--PIKFDGVDMTYRNEVNRIIADFVKYYSATDAVLKLNIDPEQYRFGIT---K--IF--F-RAGQLARIEE-AREQRLGSEQTKSDYLKRANELVQWINDKQASLE-SRDFGDSSV--AYNGVPELTERKDTFFAQQWTGVKSSAETYKNTLLAELERLQKIEDLHHHHHH--H------------------------------------------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |