>PF16044 (190 residues) GILCFQHCDKKVFCFELPNLCPVCKKNLSTEQFKLLPIRIPYPFVRAAQHPCSILIKPTS GDFLNDYFNSVDLHIGVTDSTGAVVEYDKNGLQRQKNNSWNQCLVLDGMDEPWADQWDEA LKAVIKEGHWTPQMYNENSYNCYTFVLAFLKKLKHDLLSNAAYSSTYFCEKFILPRTTAA GKYISLYRKL |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | GILCFQHCDKKVFCFELPNLCPVCKKNLSTEQFKLLPIRIPYPFVRAAQHPCSILIKPTSGDFLNDYFNSVDLHIGVTDSTGAVVEYDKNGLQRQKNNSWNQCLVLDGMDEPWADQWDEALKAVIKEGHWTPQMYNENSYNCYTFVLAFLKKLKHDLLSNAAYSSTYFCEKFILPRTTAAGKYISLYRKL | |||||||||||||||||||
1 | 3ebqA | 0.13 | 0.08 | 0.63 | 0.93 | DisCoVER | ------------------------------------------------LYPVKLYVYDLSKGLARMLGKEGIWHTSIVVH-KDEFFFGSGGISSCPPGGP-PDSVVDVGS--TE-VTEEYLSSLGES-LFRGEAYNLFEHNCNTFSNEVAQFL-T----GRKIIT----------DLPSEVLSTP-FGQ- | |||||||||||||
2 | 3kw0B | 0.08 | 0.06 | 0.69 | 0.83 | DEthreader | ----------------YF--Q--------------GGTDKFNIIDYLINLKTDIFLCGSKLIKK-------FSHTGIIVKWTLIESVEDDGVRIVPLEHYISLFIARHLVDSEIRNLIKVGFSLLN-GY-EIAIVAIGGGICSEFVNECFKK-I-G-V--EFLTDSHIADHHV-LP--AQ---------- | |||||||||||||
3 | 2if6A | 0.08 | 0.06 | 0.75 | 1.21 | CEthreader | ----------------------------------------------WQPQTGDIIFQISRSKAIQLATHSDYSHTGMLVMRPYVFEAV-GPVKYTPLKQWGKYVVRRVLSVEQQQKLAQTAKRYLGKPYDFSFSWSDDRQYCSEVVWKVYQNALGMRVGEQQKLKEFDLSNPLVQAKLKERYGKNIPLEE | |||||||||||||
4 | 2if6A | 0.08 | 0.05 | 0.70 | 0.70 | EigenThreader | ----------------------------------------------WQPQTGDIIFQISRSSQIQLATHSDYSHTGMLVMKKYVFEAVGPVKYTPAHGEKGKYVVRRVLSVEQQQKLAQTAKRYL---GKPYDFWSDDRQYCSEVVWKVYQNALGMRKEFDLSNPLVQAKLKERYGQAVFD--------A | |||||||||||||
5 | 3ebqA | 0.16 | 0.11 | 0.67 | 0.77 | HHpred | -------------------------------------------------YPVKLYVYDLSGRRLLGKQLEGIWHTSIV-VHKDEFFFGSGGISSCPTLLGPPDSVVDVGTEVTEEIFLEYLSSLGE-SLFRGEAYNLFEHNCNTFSNEVAQFLTGRKIPSY---ITDLPSEVLSTPFGQALR-------- | |||||||||||||
6 | 3ebqA | 0.17 | 0.09 | 0.57 | 0.73 | MRFsearch | -----------------------------------------------------------------------IWHTSIVV-HKDEFFFGSGGISSCPTLLGPPDSVVDVGTEVTEEIFLEYLSSLGES-LFRGEAYNLFEHNCNTFSNEVAQFLTGRKIPSYIT---------DLPSEVLSTPFGQALRPL | |||||||||||||
7 | 3ebqA | 0.14 | 0.09 | 0.69 | 0.60 | FFAS-3D | -----------------------------------------------NLYPVKLYVYDLSKGLMLGKQLEGIWHTSIV-VHKDEFFFGSGGISSCPPGGPDSVVDVGSTEVT-EEIFLEYLSSLG-ESLFRGEAYNLFEHNCNTFSNEVAQFLTGRKIP-------SYITD--LPSEVLSTPFGQALRPL | |||||||||||||
8 | 5cqcA1 | 0.16 | 0.14 | 0.86 | 0.79 | SPARKS-K | QIFLFRPDSDYVAGYHVDAKAGWVNDKLDRSKATQPTFILPFVEMPTDQHQVLLTISYDP--------KSKQLTPTVYDSIG-----RDTY--SESLSYRTTC----------DEILTQSIEKAIKSTDFTLGKYNTEG-NCGSYTFRTIKEVISSGTTSNYLTHVQDIESCIKYRVVDIESALTEGKTL | |||||||||||||
9 | 2wp7A | 0.13 | 0.07 | 0.56 | 0.64 | CNFpred | ------------------------------------------------------------------------WHTSIVVH-KDEFFFGSSGISSCTPGPPDSVVDVGNTEV-TEEIFLEYLSSLGES-LFRGEAYNLFEHNCNTFSNEVAQFLT------GRKIPSYITD--LPSEVLSTPFGQALRPFL | |||||||||||||
10 | 3kw0B | 0.10 | 0.07 | 0.72 | 0.83 | DEthreader | ------------NN------------------------IKIDKYNLINVLKTDIFLCSGNYLS---KKSESFSHTGIIVKWTLIESVEDDGVRIVPLEYISLFIARHLQVDSEIRNLIKVGFSLLN-S-GYDEIIVARIYICSEFVNECFKK-IG-VE--FLTDSFIFPEHIAADH--LP--AQ--E--- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |