Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | PAEHPFAFTASFVGFCHGCTGIYTRFFDSSCGAEGSEGKCTNRVKKLTSSCMEIITVPLANMDLYRSSKQSSALALGHGLFIIPLAFDLTFKFFATEGDEGESTAILKDLTVLGNIVSLLFFAVNENNLPAGIMSLSAFFSYSGSMVMEYMLNGTEEKSTLAGYALFFACMSSAL |
1 | 1m56A | 0.03 | 0.03 | 0.89 | 1.00 | DEthreader | | IGVPLFAWSIFVTALIA--L--------------QPGDPVLYQHILFFGHPEVIIV-LPAFGIVSHVAPIYLPMVYAMVAIGVLGFVVWAHHMYTLSLTQQSYFMMATMVIAVPTGIKIFSWIATMWG-LFLFLFTVGGVT-GIVLSQSVDRYYHDTYVVAHFHYVMSLGAVFGG |
2 | 6qq5A | 0.06 | 0.05 | 0.86 | 1.17 | DEthreader | | RALGKYLFLVVALFGFQVLLGGFTAHYTVEGQKIDLSQFPYSLVRTWHIQSALFWIATGFLAAGLFLAPDQKAGVDILFALVLVVVGSFAGNYLAIPPLNFWLGRLWQIGKFAGICFWLVLMLRGIVATASVGAIGLFYGAG---F-FYGERTH--------------------- |
3 | 3ay5A2 | 0.07 | 0.06 | 0.85 | 0.78 | DisCoVER | | -DNKALLMLTKNVDFVKDAHEEMEEESDPQDLYW--SEDDQELIIPCLALVRASKACLKKIRMLVANGKKLDDIVDISDEISPSVDDLALSIYP-PM--SHLTVRINSAKLVSVLKKALEITKASH-V--TPSWIPLLINAIDHCMN--RIKELTQSEL---------------- |
4 | 3a7kA | 0.10 | 0.10 | 0.93 | 1.00 | DEthreader | | PRKLIAVSTLV-VVSASY-GLATIS-L--ASSV--EVDGVV--TM-WG-YLTWLST-PMILLALGLLAGSNATKLFAITFDIAMCVTGLAAALTTSSHLMRWFWYAISCACFIVVLYILLEWAQDAAFSTLKLLTVVMWLGYP-IVWALGVVAVLPGYTSWAYSALDIVAKYFAL |
5 | 6wc9A | 0.11 | 0.11 | 1.00 | 0.67 | CEthreader | | SKERVEAFSDGVYAIVATLLILDICEDNVPDPKDVKELSATGPRFLAYFGSFATVGLLWFAHHSLFLHRAMGLLNTLSLAFVGGLPLAYQQTSARQPRDELERVRVSCTIIFLASIFQLAMWTTALREHVLMFAKLALYPCASLLAFASTCLLSRFSVGIFHLMQIAVPCAFLLL |
6 | 2yevA3 | 0.09 | 0.09 | 1.00 | 0.77 | EigenThreader | | VDHKKIGLMYTATAFFAFALAGRTQLAVPNNQFLTGEQYNQILTLHGATMLFFFIIQAGGNFVVPLMLGARDRVNAFSYWAFLGAIVLALMSYFFPGGSGVDFYLAAILLLGFSSLLGNANFVATIYNLAASVLNLFSLAGLTAATLLVLLERWFNGDPVLFQQFFWFYSHPTVY |
7 | 5tj5A | 0.18 | 0.17 | 0.92 | 0.29 | HHpred | | ------MKLSILMGFIHMTYSYFFSLANHLD-IFIPGLLSVCIVYKWAVDWVKGLLNMLINMFLSPGTIQAQVFLLLMALVCIPWLLLVKPLHFKF--D-IMIHQVIHTIEFCLNCVSHTAS---YLRLWALSLAHAQLSSVLWTMTIQIAFGFRGVFMTVALFAMWFA-LTCAV |
8 | 5ogeA | 0.12 | 0.10 | 0.89 | 0.38 | MRFsearch | | ---MNFVMLFVQSLVCTITLIILRILGFR-------SLNKTDAKNWFPISFLLVLMIYTSSKALQYL----AVPIYTIFKNLTIILIAYGEVLFFGG-----SVTSMELSSFLLMVLSSVVATWGDFNPGYFWMFTNCITSALFVLIMRKRIKLTFKDFDTMFYNNVLALPILLL |
9 | 6ob6A1 | 0.12 | 0.11 | 0.95 | 0.80 | FFAS-3D | | PQDRYAVWLIFFMLGLGTLLPYFTNRLDMNS--------LSAIFNNVMTLCAMLPLLLFTYLNSFLHQRIPQSVRILGSLVAILLVFLITAILVKVQLDALPFFVITMIKIVLINSFSLFGLAGLFPASYTAAIMSGQGLAGFFASVAMICAIASGSELSESAFGYFITACAVII |
10 | 6w2wA | 0.07 | 0.07 | 0.96 | 0.81 | SPARKS-K | | EVNERVKQLAEKAKEVIEIVKLAELAKQSTD------PNVVAEIVYQLAEVAEIKEILQEALRLAEEQGDEELAEAARLALKAARLLEEARQLLSKDPENEAAKECLKAVRAALEAALLALLLLAKHPQDAVQLATAALRAVEAACQLAKQYPNS-DIAKKCIKAASEAAEEASK |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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