Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| Seq | DLSRTIPTRRRQQNKKKNGNGDTFPNDNINSLQYDNSPIFYIRLPPTPYMFVPGLGYVSQPPTLGPPMSPMMPQGMPPQVADPFINLPIDFVSNGKPTGVYQWSGAPTYPQVPQMSVDPYGYGPQPMMPSRPNYNPSYQPKPKPKPSPPTNSKVTNLKGQFVFNGKPGDSVYVLRDTYNSIYSD |
1 | 7cn9A3 | 0.03 | 0.02 | 0.69 | 0.99 | DisCoVER | | RFPNIT-------------------------------NLCASVWNR-KRISNCVA--------DYSSASFSTFKCYGVSPLNDLCFTNV-YA-D--S--FVIRGD---EVRQIAPGQTGKIADYNYKCVIAWNS---NNLDSRLFRKPLQSYGFQPYQPYRVVVLSFELLAPATVCGPK----- |
2 | 4tqjA | 0.08 | 0.08 | 0.97 | 0.62 | CEthreader | | HLDIVGFGDKHVFISRNNGDGTFAPAKSVIDNFCIDHPRFVADLTGDGTADIIGCGALNNGGGVFGQVKLVINDFGTDKGWQAAKHPRFIADLTGNGRGDVVGFGNAGVYVALNNGDGTFQSAKLVLKDFGVQQGWTVSKHRRFVVDLTGDGCADIIGF------GEKETLVSYNDGKGNFGPV |
3 | 3ottA | 0.06 | 0.05 | 0.88 | 0.62 | EigenThreader | | KDN---QIYVGTYNGSNGLPVHSSQSNLFVNSTRQSTGKSLALDGNGDLLAGTDNGLNDTTPLQHDSRNI-------QSLTNNIIWN-IFAD--QEHNIWLGTD----YGIYNSLSQITGTGDGNQSKGFDPAGERHDAIMGDKTYPLSHNRIRHI-----YEDKE-QQLWIATDGNTYNTNWT |
4 | 2xt0A | 0.15 | 0.07 | 0.46 | 0.23 | HHpred | | EFVRTPDDRFADLPDFPYAPHYL---------EGPGLRMHYVDEGPHTFLCLHGEPSWSF--LYRK-MLPVFTA-------AGGRVVAPDLFGFGRSDKVYTFG-------------------------------------------------------------------------------- |
5 | 6h3iA | 0.16 | 0.07 | 0.43 | 0.70 | MRFsearch | | ---------------------------------------NARKLTTNEYTFNPQLGYISLQ---------------QRLANDEILAVAFEYTVG---GKVYQVGEFGSDGVDATVVTGNNSSNQAII---------------------------------------TQSLVLKML--------- |
6 | 2ftcC | 0.11 | 0.10 | 0.90 | 0.41 | FFAS-3D | | ---------------LKLGMMPLWTKDGLKYTSKENCNGKMATLSSRFRKATSILEFYRELGNITDNAAIKPGTPLYAAHFRPGQYVDVTAKTIGKQGVMKRWGFKGQPATHGQTKTHRRPGAVATGDIGRVWPGTKMPGKMGNIYRTEYGLKVWRIHNIIYVNGSHKNCLVKVKDSKLP---- |
7 | 6h9cZ | 0.10 | 0.09 | 0.92 | 0.83 | SPARKS-K | | TQEYTLSHTGGLLGS------SKVTTASNQTAPQRETAIISFEVPFSEIEYVGQRDATRFVPRTTEEITGT-------ANDDTVVQLQANIQPAGEPVVVAYNVTQGAQVEIADVNYATDEVTLATDPADGDTFRLVNQFGQEEGRVYPWATPLYNLHGSVTWQ-ENETVEVLLDAPQAITWED |
8 | 1pz3A | 0.09 | 0.03 | 0.36 | 0.37 | CNFpred | | -----------------------------------------------------------------------------------ALLLECDVRSFYRVIEHIVLEHD--------NVKQTNSAQSSPVVPHRNGDAQLSD-------------------RKVSATLPKLSWNVIRLG-------- |
9 | 1llwA | 0.04 | 0.03 | 0.73 | 0.67 | DEthreader | | -PTF-DPLRNMSLAMFLGILVISAICR-VEAGLKLSKM--MSGLSRHSGEG--KQIA--RFGVTPEYLGKQLE---------IKMAQG--------GQLPISPPPHHIYSDLALIYDLHQ--I-NPEAQVS-------------IG-GTIAGVQISGHDGGTGVCHTN------GLYGATGGNL |
10 | 5kouA | 0.09 | 0.09 | 0.97 | 0.64 | MUSTER | | GELRVLLTVGSIMSPNSADRQVWLNKTLTAPGTNSNDNLVKIAHDLGHYLIMQGFMHIKTVEWYTPDFQPSRDPTPIASYTNNLIKPLADFKVQCYMSYFKRESHDNDGVANLTVRSMTSPETIRFQVGELKENNLPEGWVWDRVELKSDTPYYADQALTYFITPPPVDSQILFEGNT------ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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