>PF16002 (187 residues) VRRRVDMSAFSILPKHKQNPYHIKMEEDSQGNDETRSFVLTHLSSYKVSALNCVLCKTVL PVFDRYPMIDGTFFLSPQAYGENVVQVISDGRLQFINAVCVGCLEGGSDIRCAACKKKWD GSTLLLGTMYSYDIFAAMPCCQKRLTCKHCRRAVVDVNTGLSFYSEYSRMIACPYCKAYD YHFIRPM |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | VRRRVDMSAFSILPKHKQNPYHIKMEEDSQGNDETRSFVLTHLSSYKVSALNCVLCKTVLPVFDRYPMIDGTFFLSPQAYGENVVQVISDGRLQFINAVCVGCLEGGSDIRCAACKKKWDGSTLLLGTMYSYDIFAAMPCCQKRLTCKHCRRAVVDVNTGLSFYSEYSRMIACPYCKAYDYHFIRPM | |||||||||||||||||||
1 | 5olmA | 0.09 | 0.05 | 0.53 | 0.54 | DisCoVER | -------------------------------ARLTMMWV---T----CPIC--LD----P-FVEPVSIECGHSFCQECISQVGKSVCPVCRQ-RFLLKN--------------------------LRPNRQLAMVRCVHGERLHLFC-EKDKALC-----W-VCAQSRKHRDH-AMVP--L------ | |||||||||||||
2 | 6dhvA | 0.04 | 0.03 | 0.72 | 0.67 | DEthreader | --------E-ESPDLETALLPKIRYAYLTTPLQ-VAKRIISIIEEGYDK-----F---LIRFDAVQASPVLIFVTIDDCLHVDSVVSKLRSCGAILKSIVAASGITGLKTTMSLCEEIIGPFLVYA---------------------TPTTMTAPV-------------VGYPIGLVAPVTKYDILN | |||||||||||||
3 | 3v4pA | 0.05 | 0.05 | 1.00 | 0.51 | CEthreader | SQHTTEVVGGAPQHEQIGKAYIFSIDEKELNILHEMKGKKLGSYFGASVCAVDLNADGFSDLLVGAPMQSGRVFVYINSGSGAVMNAMETNLVGSDKYAARFGESIVNLGDIDNDGFEDVAIGAPQEDDLQGAIYSSTFSQRIEGLQISKSLQSISGQIDADNNGYVDVAVGAFRSDSAVLLRTRPV | |||||||||||||
4 | 6gylW | 0.09 | 0.06 | 0.74 | 0.55 | EigenThreader | -------------PIDDIVKNLLKFVVRGFYGGSFVLVLDAILFHSVLAED-------DLKQLLSLRSDRLISIHKQREYPKSVE---------RVYYYVKYPHAIDAIKW------KVHQVVQ------RLKDDLDKNSEPNGYMCPICLTEAVQLLNFDRT------EFLCSLC-DEPLVEDDSG | |||||||||||||
5 | 2pffB | 0.21 | 0.14 | 0.68 | 0.43 | HHpred | QEQVQDYVNKSHLPAGKQVEISLVNGAKNSGPPQSLYGLNLTLRKAKAP---SGLDQSRIPFSERKLKFSNRFVASPF-HSHLLDLVKNNVSFNAKDI----------QIP---VYDTFDGSDLRVLSSISERIV----DCIIRLPVK--------------------------------------- | |||||||||||||
6 | 2miuA | 0.20 | 0.10 | 0.50 | 0.55 | MRFsearch | -------------------------------------------------RFDCHHCNESLF---------------------GKKYILRE-----ESPYCVVCFETLFANTCEECGKPIGCDCKDLSYK-------DRHWHEACFHCSQCRNSLVD-----KPFAAKEDQLLCTDCYSNEY------ | |||||||||||||
7 | 3a1bA | 0.16 | 0.10 | 0.63 | 0.34 | FFAS-3D | -----------------------RTKQTARKRKQLRERLVYEVRQKCRNIEDCISCGSLNVTL-EHPLFVG--------------------------GMCQNCKDDGYQSYCTICCG---GREVLM---------CGNNNCCR-CFCVECVDLLVGPGAAQAAIKE--DPWNCYMCGHKGTY----- | |||||||||||||
8 | 2mpoA | 0.20 | 0.16 | 0.78 | 0.67 | SPARKS-K | ELVEVPCNSVHVQGVMTPNQM-VKVTGAGWDN----------------GVLEFYVTRSHLASIMCYSKKAGKCFLKNFSGEDSEVSLPIKSHNDAFMFVCSS--NDGSALQCDLDNTNWKVNTVDLGVSVSPDL--AFGLTADGVKVKK------------LYASSGLTAINDDGCKA--------- | |||||||||||||
9 | 3lx1A | 0.08 | 0.04 | 0.52 | 0.62 | CNFpred | -------------------TAKVVLLG------EVLKEGIKDASLV-SDAIKFIAKENEFTMKAEGETNEVEIRLTLED--EGLLDLEVETKSAYGIRYLSDMVKGIDEVILRFG----NEMPLQMEYMI--------------------------------------------------------- | |||||||||||||
10 | 2ww2A | 0.09 | 0.07 | 0.78 | 0.83 | DEthreader | EFVDVNPLMGT-DE-QLRTFYSCLYLLFFLLYPEVSERVTQSIINAYFMPEW---MIGNNVSLLVDAW--------LEAYLMSWTWSSPMIARL-QPVQH-LYNSGGYCG-------DEDNG-QTSA---VF-MFYPVYAIGSPVSAADNIRKAFTRN-YLTHDELKGGELNLS------------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |