Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | KRLAKRSIIGTRVCAPGADGIWYSGTIQGVKTPPSANQKDNTNCINLTPHTRYSVRFDSKQDISRRGLAREFRESELIGPGFKSIMDVRLKPGQKVFLTYNGRESAGEVVQHDDLKDEVTVKI |
1 | 2lvmA | 0.24 | 0.18 | 0.73 | 1.33 | HHpred | | --GHMNSFVGLRVVAKWSNGYFYSGKITRDVG-----------------AGKYKLLFD-------DGYECDVLGKDILL-------CDPIPLDTEVTALSDEYFSAGVVKGHRKESGELYYSI |
2 | 1ssfA | 0.25 | 0.18 | 0.71 | 1.70 | HHsearch | | -----NSFVGLRVVAKWSNGYFYSGKITRDV-----------------GAGKYKLLFD-------DGYECDVLGKDILLC-------DPIPLDTEVTALEDEYFSAGVVKGHRKESGELYYSI |
3 | 4xzyA | 0.08 | 0.07 | 0.88 | 0.83 | DEthreader | | --LMQQLKELLKVVLFDG-GCTGEFIDKIEDVTYVKKLK-PN-Y-FYGNLYLMFTKKTYDVIYADNPA---F-ANLTLRFTY--HTTGGN---SGSPVMNANGELIGLNFDRNWEQRSIIVDI |
4 | 1cb5A | 0.09 | 0.08 | 0.87 | 0.83 | DEthreader | | GRCWIFSCLNVRLPFM----KKLIFEFSQLFWDVEYFFLFLLNPGQ-MVNIVGVIPWYRDKD-KNYQKIGIPLFYRVKPL--FNMEDKICFLKMASEAVW--TFTAVFWFSVY----EVVV-- |
5 | 6veeA | 0.17 | 0.15 | 0.87 | 0.51 | HHpred | | ------YKVNEYVDVRDIFGAWFEAQVVQVQKRALSEDEPSSAVKTSEDDIMYHVKYDDYP----EHGVDIVKAKNVRARARTVIPWENLEVGQVVMANYNGRELYGNIRL--LNDSQL---- |
6 | 6f0qA1 | 0.06 | 0.05 | 0.84 | 0.67 | DisCoVER | | NTQTVLPFTLNTPSGVAVDSTVWVTDHG-NNRV--VKLAAGSNTQTVLPFTLNTPSGVAV-DSAGTVWVTDHGNNRFTLNTPSGVAVD--SAGTVWVTDHGNNRVVKLA-------------- |
7 | 1ssfA | 0.26 | 0.18 | 0.70 | 0.77 | MRFsearch | | ------SFVGLRVVAKWSNGYFYSGKITRDVG-----------------AGKYKLLFDD-------GYECDVLGKDILLC-------DPIPLDTEVTALSDEYFSAGVVKGHRKESGELYYSI |
8 | 2g3rA | 0.26 | 0.18 | 0.70 | 0.91 | SPARKS-K | | ------SFVGLRVVAKWSNGYFYSGKITRDVGAG-----------------KYKLLFD-------DGYECDVLGKDILLCD-------PIPLDTEVTALSDEYFSAGVVKGHRKESGELYYSI |
9 | 6sdgA | 0.08 | 0.07 | 0.89 | 0.76 | MAPalign | | ------PPVGSVVAYLPQLPAVIPCMLNDIQLS--------ADPDSDEVYATLTLCPMSAAHAATEKSRFSLIYEFVIPYSKYLKAVKSFNVGQRFKMDPSDRRHTGTITGICSEWRSLQVNW |
10 | 6b9mA | 0.20 | 0.18 | 0.90 | 0.67 | CEthreader | | DPGFGFYKINEFVDARDLNGAWFEAQIVKVTKTPAEDGG--------PEEIVYHVKYE----DYPENGVVQLRGKDVRPRARTVYQWRQLEPGMIVMVNYNPDDPDAEIQRKRETQREVFGKI |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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