Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | TYYDPNDKVLMHQMLKEGIERLAKDTRYVLAALPDAHKLPVLRYWIYQRYGKVYTQKEMAEIFKTSTLLFRALLQMQIHETLPSPIDLGRAVFIDYSCHNYLMRKCDRIRDLFYKRVDQAIMNQSRHLYIAMTPYAYAGRSPNKTVFAYLPSRPSDI |
1 | 2c6fA1 | 0.02 | 0.01 | 0.56 | 0.58 | DisCoVER | | --------------------------LDLQ--PGNFS--AD--E-------------------AGAQLFAQSYNSSAVLQSASWAH---------------DTNITAENARRQEEAALLSQEFAEAWGQKAYEWQNFTDPLRRIIGAVRTLANR--- |
2 | 3kcrA | 0.08 | 0.07 | 0.83 | 0.83 | DEthreader | | ------YTA-GAQ-I--PA--IF--E-FWQTASRITLGEALFVGGAF-GILTPLLAFLIIQIAFGSIILIYLGIGLFIAVSTIFALGGLWKLNIQGVP---NIEYIAPIIGTIIVF--V--VILAALANI-LWGLALMGIPILG-AGIA-YLSTPHY |
3 | 5h9dA | 0.02 | 0.02 | 0.88 | 0.61 | CEthreader | | QVAVALELIHMATLVHDDVISDKRRGKLTISKKWDQTTAILTGNFLLALGLEHLMAVKDNRVHQLISESIVDVCRGELFQFQDQFNSQ-------------------QTIINYLRRINRKTALLIQISTEVGAITSQSDKETVRKLKMIGHYIGMSF |
4 | 6valA | 0.06 | 0.06 | 0.92 | 0.67 | EigenThreader | | NCPCLPNLAYGLGVLLVPPLILFLLGFVLAPAVWVSVTLLDGITCAFVLARIPCKEYLRCISQALGWCFVLLMTTLAFLVRSLKHYCSPLSYRQEAYWAQYRANESRVLAANNVRRFF------GQWNAITGVYLYRPLYSRLHKWAQGL------- |
5 | 4bq2A | 0.13 | 0.10 | 0.78 | 0.31 | HHpred | | DVFDPEFKVRAMETARVVSEEIKNSPWCVLGPSEGVPTRQAFSKLLKAKYK---TIAALNNAWGLKLSSWAEFDL---GVDVKAL-------PVTDTLRADYSMLLSAYADQYFKVVHGAVEHY-------MPNHLYLGARFP-------------- |
6 | 5tw1F | 0.12 | 0.11 | 0.89 | 0.42 | MRFsearch | | -------GMAFLDLIQEGNLGLIRAVEYKFSTYATWWIRQAITRAMADQARTIRIPVHMVEVINKLGRIQRELLQDLG--REPTPEELAKEMDITPEKVLEIQQYFTLLQDQLQSVLETLSEREAGVVRLRFGLTDGQPRTLDEIGQVY-------- |
7 | 2ig3A | 0.09 | 0.07 | 0.80 | 0.66 | FFAS-3D | | MKFETINQESIAKLMEIFYEKVRKDKD--------------LGPIFNNAIGT--SDEEWKEHKAKIGNFWAGMLLGEGDYNGQPLKKHLDLPPFPQEFFEIWLKLFEESLNIVYEEMKNVILQRAQMIASHFQNMLYKYGG---------------- |
8 | 6w2rA1 | 0.08 | 0.05 | 0.62 | 0.54 | SPARKS-K | | -GTTEDERRELEKVARKAIEAAREGN-------TDEVRLQRALEIARESG----TKTAVKLALDVALRVAQEAAKRGNK-----------------DAIDEAAEVVVRIAEEVLEEIAKAVLKSEK------------------------------- |
9 | 5w81A | 0.06 | 0.06 | 0.94 | 0.49 | CNFpred | | --------TISKKLHQKMLHAVLSAPMSVLNTMKTGRIMNRFTKDMATIDDMLPLLMFDFVQLTVVVVGCILVVSIVRPYIFLAATPLAIIFIVMRKYFLRTGQQLKQLETEARSPIFSHLIMSLKGLWTIRAFERQA-NTHTATWFLYLSTLRWFL |
10 | 5oybA | 0.06 | 0.05 | 0.85 | 1.00 | DEthreader | | -PIDREGLFAWLGAYTQMLI-PASIVIVFS-FMAWAATFMEHWKRKQMRLYDLKD-IG-IWYNILRGVGKLAVIINAFVTSDPRVHTLSSFPPWSEHKYD-ISKDFWAVLAARLAFVIVFQNLVMFMSDFVDWVIPDIPK----------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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