Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | LSRLGLIPAVRDKDLKMLMKLSGGNDLAFLWFLMELYYKKPGDEYSSLNEQLILTSIAHLDMITTLRELDNILPPGHQSKRQLEKRRKQKLRDKSWLSPPHKLVKKHSSPYFNKLERPVQYGKPLEVERPDFKVKFFRYEVYKDRNYVPPNEENRWYAKHSFNRAKRI |
1 | 1zd4A1 | 0.03 | 0.02 | 0.73 | 0.64 | DisCoVER | | LRAAVFD-L------------DGVLALPAVFGVLKGGPEGATTRLMKGETLSAISARKINRPMLQAALMLRTTAILTN---------------------------TWLDDRL-LKMHFDFLIESCQGMVKSPSEVVFLDDIILVQDTDTALK--ELEKVTGIQLL--- |
2 | 1jqoA3 | 0.10 | 0.08 | 0.77 | 0.83 | DEthreader | | ----------DALVDRFLNILQLHGPSLREFVQECYEVADGKGDTKLGELGAKLTGLAPADAILVASSILHMLNNFTRHLVWDLLEMVFA---------GDPGIAGLY-----------------GLLRNPTNVATKRIPKVTP--QPPLSKEAGLVKLNDILMKAAQ |
3 | 1fnnA | 0.07 | 0.07 | 1.00 | 0.49 | CEthreader | | GKYVIRFSPYTKDQIFDILLDRASYSEDILQMIADITGAQTPLDTNRGDARLAIDILYRSAPEDVRKSSKEVLFGISLPLHEKLFLLAIVRSLKISHTPYITFGDAEESYVCEEYGERPRVHSQLWSYLNDLREKGIVETRQNTTLISIGTEPLDTLEAVITKLIKEE |
4 | 1f5nA2 | 0.07 | 0.07 | 0.99 | 0.62 | EigenThreader | | IENSAAVQKAIAHYEQQMGQKVQLPTLDLHRDSEREAIEVFIRSSFKDLAAQLEKKRDDFCKQNQEASSDRCSGLLQVIFSPLEEEVKAKKKYYEEPLQTYLKSKRSYQEHLKQLTEKMENDRVQLLKEQERTLALKLQEQEQLLKEGFQKESRIMKNEIQDLQTKM- |
5 | 4ci6B | 0.10 | 0.09 | 0.88 | 0.37 | HHpred | | -------PYGNRYYYALLMDEVDGWRCSDTLRSLADSWKQ---GKINSEAHRLLDVTNHLAKAGI---VHNDIKPGNVVFDR--ASGEPVVIDLGLHSRSGEQPKGFTESFKAPELGVGGASEKGIEGFEKDPEIKPNQGLRFINGYPIETALHEFLSDGTID----- |
6 | 1sxjC | 0.19 | 0.10 | 0.49 | 0.48 | MRFsearch | | ----------SPNAEKALIELSNGDMRRVLNVLQSCKATLDNPDEDEISLKAVLKSILEDDWGTAHYTLNKVRSAKGLALIDLIEGIVKILED--------------------------------------------------------------------------- |
7 | 2lt3A | 0.18 | 0.09 | 0.49 | 0.47 | FFAS-3D | | MGSVGLREIISEEDVKQVYSIKTGSVFEIAEVLRDLYLLKGDKDLSFGERKMLDTARSLL-----IKELSLAKDCSEDEIESDLKKI--------------------------------------------------------------------------------- |
8 | 1q88B | 0.09 | 0.08 | 0.90 | 0.73 | SPARKS-K | | LTQKTDGTVMRDFLIEKAAEYFKQQPKQNAIEVISAIMAPQEEQTKSKADLYKFLAMFYETIMLKIASLLLISNNKGHWLTFDPQAEKNANNQR-----------DSISGWFDQ-----NEPNCLILKTPTGIRKIWNKPLIEATGQYLMDENDSWFEMKPIETYLTA |
9 | 5iztA | 0.15 | 0.05 | 0.35 | 0.53 | CNFpred | | -------------ERNKFYALMDFDKIEQFGSIMETLYNENQ--NHSLIRELMISGLTQISFELALEEINKKIE---------------------------------------------------------------------------------------------- |
10 | 1xi5A | 0.08 | 0.05 | 0.68 | 0.67 | DEthreader | | INYRLLTGIS---A--------------------RVVG--------QPI-EGHAAFALIMQVFLYDIYMINVLQNPD-AEELFARKFNAATRFQSLLEELCPLGRKQDTT-QISPDAQCALVAILGETAGSVESLEQLI-SQDP------------------DPNIAD |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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