>PF15992 (259 residues) SWDVADLLPHLQDEAINVDELQMIKRHHLAELLSNFRFGTRIRFEHHLERWRRWLNVPLQ GVQGQSQTHCQGCRCAESAAPSIICHPQMGGQSDSAADSGKSDDLAKTLPAEPLVSLTDP RETVQAPFHIPMQPQLEPSEILSTTLVTNVKEEDSGDQVTGEDRVVTVLGILQAGGMKSQ SLLDRLGQQEALDAVQRLLLIQLICSYYEDNQLHLTLQRSHLLEREILQLFPKEQLQYYR TERRGKIYVRFTNMKRNKR |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | SWDVADLLPHLQDEAINVDELQMIKRHHLAELLSNFRFGTRIRFEHHLERWRRWLNVPLQGVQGQSQTHCQGCRCAESAAPSIICHPQMGGQSDSAADSGKSDDLAKTLPAEPLVSLTDPRETVQAPFHIPMQPQLEPSEILSTTLVTNVKEEDSGDQVTGEDRVVTVLGILQAGGMKSQSLLDRLGQQEALDAVQRLLLIQLICSYYEDNQLHLTLQRSHLLEREILQLFPKEQLQYYRTERRGKIYVRFTNMKRNKR | |||||||||||||||||||
1 | 3msrA | 0.09 | 0.08 | 0.90 | 0.65 | DisCoVER | ARTVLGDIPVEKLGITDCHDHF-IKN-GGPEVTIVTDPPNVGR-DVLKTLEIANGNVISTGFHKCVEIEEGDEYNYNVKRSKAKAGIIKAGTGYIDRLELKALEVAARTSITGCPILV-----HTQLGTALAKLIGFGANPDKIQISHLNKNPDKYYYVITGVTLCFDG--PDRVKYYPDSLL--AENIKYLV------DKGLQK-------HITLSLDAGRILYQRNYFLVGVSKEAIFDILVNNPKRVLAFDEKRN- | |||||||||||||
2 | 4iibA | 0.06 | 0.05 | 0.78 | 0.67 | DEthreader | -------FPAGVNVGLG-AAGPLGDPALTGVLFAETGIQVATAKHYILNEQEFRQISSQISGCQNLNLKGFVMSDWHSMPG--RIMAAYYKVGRRLYQVNVQRNHSEVIKLADSTVLPTPEQATDNWALVNSDA-GEGYISVNEGDRNNLT------------WKNGDNLIKAAACNTIVVVEWYDHPN-VT---AI-L-WA-GLP--SG--------------------W-GKTREAYGDYL-ID---E-GHGVSSSR | |||||||||||||
3 | 4ui9O | 0.06 | 0.06 | 1.00 | 0.77 | CEthreader | SYVLLEHSVKKAVHFGLPYLASLGIQSLVQQRAFAGKTANKLMDALKDSDLLHWKHSLSELIDISIAQKTAIWRLYGRSTMALQQAQMLLSMNSLEQQNNTESFAVALCHLAELHAEQGCFAAASEVLKHLKERFPPNSQHAQLWMLCDQKTALNSIEGVYRKAVVVISVLLSVAEPMLLQALALSKEYRLQ-YLASETVLNLAFAQLILGIPEQALSLLHMAIEPILADGAILDKGRAMFLVAKCQVASAASYDQPKK | |||||||||||||
4 | 6yj6A2 | 0.04 | 0.03 | 0.92 | 0.63 | EigenThreader | LSYEQWFELFME---LSLVIAKYQSVEDGLSVVETAQMKFVKLAIVLQKVLQVFMYSLCRGPSSLNILSSTIQQKFFLRQLKAFDSCRYNTEVNGQASITNKSSPYLYYIYAVLLYSSRGFLSALQYLTRLEEDIPDDPMVNLLMGLSHIHRAMQRLTAQRHFQI---FHGLRYLYRYHKIRKSLY-----TDLEKQEADYNLGRAFHLI----GLVSIAIEYYNRVLENYDDGKLKKHA------AYNSIIIYQQSGN | |||||||||||||
5 | 2d8cA | 0.13 | 0.03 | 0.26 | 0.32 | HHpred | YWSPKKVADWLLEEHFTGQDLINLTQEDFKKPLYRVSSDNGQRLLDMIETLKMEHHMEAHKNSGPSSG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
6 | 6qwvA | 0.12 | 0.05 | 0.44 | 0.58 | MRFsearch | ---FSKYCESFREQQVDGDLLLRLTEEELQTDLGMKSGITRKRFFRELTELKTFAN-------------------------------------------------------------------------------------------------------YSTCDRSNLADWLGSLDPRFRQYTYGLVSCGRVSEQQLLEDCGIH-----------LGVHRARILTAAREML---------------------------- | |||||||||||||
7 | 3k1rB | 0.19 | 0.05 | 0.24 | 0.54 | FFAS-3D | SLHMEDFAALLRQEKIDLEALMLCSDLDLRSI--SVPLGPREKILGAVRRRRQAMERPPALEDTE-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
8 | 2gafD3 | 0.14 | 0.10 | 0.75 | 0.77 | SPARKS-K | -TSMEELARDMLNSMNVANMIKMFQIDRLEDLSKDPE-KFNARMATMLEYVRYTHGIVFDGK---RNNMPMKCIIDENNRIVTVTTKDYFSFKKCLVDENVLSSDILDLNADTSCDFE----------------SVTNSVYLIH-----------------DNIMYTYFSIL-------------LSDKGKVHEISARGLCAHILLYQMLTSGEYK----QCLSDLLNSMMNRDKIPIYSHTERDKKP----------- | |||||||||||||
9 | 5zabA | 0.09 | 0.05 | 0.58 | 0.60 | CNFpred | --RHKHMFNFLDNGKISLDEMVYKASDIVINNLG--TPEQAKRHKDAVEAFFGGAGMKY-------------------------------------------------------------------------------------------------------GVETDWPAYIEGWKKLATDELEKYAKN---EPTLIRIWGDALFDIVDKDNGAITLDEWKAYTKAAGIIQSSEDCEETFRDESGQLDVDMTRQHLGFW | |||||||||||||
10 | 6w98A2 | 0.07 | 0.05 | 0.77 | 0.67 | DEthreader | DQRWA-IV-GFSRIIAAVAFAL------L-----------LAPWVLLPLITMSPRAAASAVAVMTACGVAVIWWL-AHRPN-----------------MAGLAMRGLALLALATSLWTGRLVPRGTDDTSRSALVHHTIS-PELLLNERRLE------PAVVTDTPLAREIRAPGDITASSSASDSTALPNVAPGTSAAAIDW-RHSA-TVPP--GWDLG--SPLQGR---LSLAPEEPGLWVRAR-PILTVNP----- | |||||||||||||
|
|
References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |