Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | NYPATSHFDEESETYEITYRDFDNIHAVAYTEDDIELEASDILHVGLEEFISSKMPIPMPSEPQSGDFIVYLPPISCLKIA |
1 | 5yrzA | 0.22 | 0.21 | 0.95 | 1.33 | DEthreader | | TYPALFYYDDTDTTYFVHFPDFEYSATQGEGISEALAMGSEWLGITVADLIESDGELPQPSSLSLLSFISMVS--V--DVS |
2 | 5yrzA | 0.19 | 0.19 | 0.98 | 1.33 | DEthreader | | TYPALFYYDDTDTTYFVHFPDFEYSATQGEGISEALAMGSEWLGITVADLIESDGELPPSDLSLILSFISMVS-DV-ADVQ |
3 | 6g1nA | 0.18 | 0.17 | 0.98 | 1.30 | HHpred | | EFPIAVHKDD-GSVYGVTVPDIPGVHSWGETIDDAIKNTREAIVGHVETLIELGEDVETCSTVYAGAVWALVSVDLS-QLD |
4 | 6g1nA | 0.17 | 0.16 | 0.96 | 1.26 | DisCoVER | | EFPIAVHKD-DGSVYGVTVPDIPGVHSWGETIDDAIKNTREAIVGHVETLIELGEDVTCSTVLVAGAVWALVSV-DLSQL- |
5 | 6u0iA | 0.23 | 0.22 | 0.95 | 1.33 | MRFsearch | | -YPVTLTPAP--EGGYVSFVDIPEALTQGETVAEAE-AAKDALLTAFDFYFEDNELIPLPSPLNSHDHFIEVPLSVASKVL |
6 | 2dsyD | 0.16 | 0.14 | 0.85 | 1.91 | SPARKS-K | | AARARYELIADEEPYYGEIPDLPGVWATGKSLKECEANLQAALEDWLLFLLSRGETPPPLGEVRIELPH------------ |
7 | 6g1nA1 | 0.17 | 0.16 | 0.96 | 1.26 | MAPalign | | EFPIAVHK-DDGSVYGVTVPDIPGVHSWGETIDDAIKNTREAIVGHVETLIELGEDVFTCSLVYAGAVWALVSVDLSQL-- |
8 | 6g1nA1 | 0.17 | 0.17 | 0.99 | 1.00 | CEthreader | | EFPIAVHKD-DGSVYGVTVPDIPGVHSWGETIDDAIKNTREAIVGHVETLIELGEDVETCSTVYAGAVWALVSVDLSQLDS |
9 | 6u0iA | 0.22 | 0.21 | 0.96 | 1.41 | MUSTER | | RYPVTLTPAPEGG--YVSFVDIPEALTQGETVAEA-EAAKDALLTAFDFYFEDNELIPLPSPLNSHDHFIEVPLSVASKVL |
10 | 6g1nA | 0.18 | 0.17 | 0.98 | 2.19 | HHsearch | | EFPIAVHKDD-GSVYGVTVPDIPGVHSWGETIDDAIKNTREAIVGHVETLIELGEDVETCSTEYAGAVWALVSVDLS-QLD |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|