Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | TSTVMTKQYSDDQLKARKIDETPATVVAETWPLNLETVYTDANGRIASEKDILINLQPLSKNTLMSENSLELDVSEVVDNSAPLEETDASLHPTGLVSSITGTEVVDGTTTHWKTLIYGTYIDDTYAHIIESTSS |
1 | 4qeyA | 0.11 | 0.10 | 0.85 | 0.68 | DisCoVER | | GVHKIVVEQSG------NTDDFDLNIAFGAANTGVAKLYNE-NGEYLGD-SYLVNKVTENKISCQTG--KEGSTCAGSVISTSE-------QAGKKLKISVIAY-ID-NKEVNRLEKEYITKGLVENFSVSTTS- |
2 | 1viwA2 | 0.05 | 0.04 | 0.84 | 0.83 | DEthreader | | FQGLGNALNLANWGPEWGLLEGAVFV-ILNPKPKMAIMLAHPYGTTRIMSEVYGMGFRNAVETQVENWWSNQFTNGG----DLNQN-----------LNTGAGTYCELSG-TVNGSA-ISLGEDDGVLAIHV--- |
3 | 4onzA | 0.06 | 0.06 | 1.00 | 0.46 | CEthreader | | LAVATSRDLKNWTKHGLAFDKAYNGRFNNLFCKSGSILTKLKGNQLVIDKVNGKYFYWGEHAIYAATSDNLIDWYPVLDEKNELKIIQPRKGHDSLLTECGPPAIRTKHGIVLVYNGKNSGKTGGNAYCAGQLLL |
4 | 4i2yA | 0.06 | 0.05 | 0.84 | 0.62 | EigenThreader | | -------SRRKWNKAGHAVPVVSGALKSEIKK----GLRLKDGGHYA---AEVKTTYKAKKPVQLPGAYIVDIKLDIVS-----HNEDYTIIKEFMRFKVHMEGSVN-GHEFEIEGEGEGRPYEAFQTAKLKV-T |
5 | 2q4nA | 0.15 | 0.10 | 0.68 | 0.26 | HHpred | | -----------------------------------PTIPSFRYGEEIRSGKPVIAYTQKTWK--LES-GAP-HAESYFRPRPDGSIEVVIAQSTGLVEVQKGTYNVDEQSIKLKSDLVGNLVDGKLSYVVR---- |
6 | 2pffB | 0.33 | 0.03 | 0.09 | 0.53 | MRFsearch | | ---------------------------------------------------------------------------------------------TGVRVIVAGTLD------------------------------ |
7 | 7abhE2 | 0.18 | 0.15 | 0.82 | 0.31 | FFAS-3D | | -----------------------SEMAVSELPGNPNAVWT-VRRHIEDEFDAYIIVSFVNATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHDKRVNEWKTKLFRVRMQGQEAVLAMSSRS |
8 | 6mrlA2 | 0.15 | 0.13 | 0.84 | 0.72 | SPARKS-K | | TQYITKSVGAT-------ASTTGPSYVVDANINVNATTANVEFF---SPGTFLITAVVYGS------TIASPSMGNGTLIGDLPVVGGSNASIWTCVFSTTG--VSTSVPT---FTQAGTGLTRVQYTITRVNSQ |
9 | 2uvaG | 0.12 | 0.04 | 0.31 | 0.58 | CNFpred | | ---------------------------------------------------------------------------------------------SGKMVEVCGTLKRDKPVMYVTSQFLYRGVYTDYENTFQRKDE |
10 | 5jcss | 0.13 | 0.10 | 0.82 | 0.83 | DEthreader | | EQKNSFATLRDLFRWALRDAVGQSGYMLLAERCEKVTVKKEM-TKGM----RLSLVCLKNKICLLALIFFLLDIVRL-NSVLEPERASENF-QFFATMNPGGDY--------KKEL--------RFTEIWVPS-K |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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