Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | ESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRQGDEQEDHTMNAFLRFLDADIQNNPQKTRPFNIQQGKKLVAGMDVNIDDEIGDD |
1 | 1vjkA | 0.03 | 0.02 | 0.65 | 0.64 | DisCoVER | | --------------------------SVKVKVKYFGVDEEEIELP-----EGA-RVRDLFGEGYDEDADVNIAVNGRYVS-WDEELKDGDVVGVFP- |
2 | 3igoA | 0.02 | 0.02 | 0.89 | 0.83 | DEthreader | | PN--ELEIAIIVFGITYMK--LLESEDCD---TQLEHPIQSSETPTISDLPSLESAMTNIRQFQAEKKLAQALASKTTLDE-TKQLEIKDTNND--- |
3 | 4m0hA | 0.08 | 0.08 | 0.98 | 0.57 | CEthreader | | FFNVRDEGKPFIVR--TRQADVKVLGGSFNVKAYQEDELAVSVRTRLLPNEQIIVNNTNGEILKKNEDAQKVTAWLQGGLYFNRTPISSVIHDLERY |
4 | 5b6lA | 0.09 | 0.08 | 0.95 | 0.67 | EigenThreader | | DWAIAVLDNTDINPGNS--GGPARGEVIGINTA--IGIGFAIPIDQAKAI-QNTLAAGGTVDQAQQNNRIPEVPGTPAERAARLQRIVEQAGLNKAL |
5 | 2w1tA | 0.12 | 0.10 | 0.88 | 0.86 | HHpred | | VRRIDDLGRVVIPKEIRRTLRIREG-DPLEIFVDRDGDVILKKYSPIELGDFAKEYADALYDSLGH-SVLICSIS-EMLERTMDQRSS--------- |
6 | 1ub4C | 0.17 | 0.10 | 0.61 | 0.78 | MRFsearch | | -KRWGNSPAVRIPATLMQALNLNI-DDEVKIDLV-DGKLIIEPVRKEP-VFTLAELVNDITPE---------------------------------- |
7 | 2l66A | 0.28 | 0.13 | 0.47 | 0.66 | FFAS-3D | | -VKVSRNYQVTIPAKVRQKFQIKEGDLVKVTFDESEGVVKIQLLKEP-------------------------------------------------- |
8 | 6efnA1 | 0.11 | 0.08 | 0.73 | 0.67 | SPARKS-K | | --------------------------PELAVHLQPHGAVMIDRKSMFYFRQLAFLLSKNLHKTARIWEIMKEEMSADQLKEELSAHPFLLDQPLHVS |
9 | 1lvaA | 0.09 | 0.06 | 0.68 | 0.58 | CNFpred | | --------------ETRKLLQSMAAAGQVTLLRVENDLYAISTE---RYQAWWQAVTRALEEFHSRYPLR-PGLAREELRSRYF------------- |
10 | 5ereA | 0.09 | 0.08 | 0.88 | 0.83 | DEthreader | | -----AFDIQIGSALVGVQEQTRPIQYYPSYGKVTFASYPYIFKVAEFQFP-LLTQTAQELNAIFKDDENQYFSIISRKVH--N--F-PVE-IFRLA |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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