Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200 220 240
| | | | | | | | | | | | |
| Seq | NITTQPHSSENYISLFKDSHKIKATGKIRGSDWGIIGSLYEEEGHNNVPILRGMVYRFLNIDPKAPWLDLESNTPIDEEQLEIRPIVPDHLKPNLKMISYVFYPKSHRFFFSRRHISPGDMMKLMNDLFKDDTIATKYGQVDVSVESTSEAIERILAIPRLTRLHIMFNRPNDDDLGGLAASLLQKIDNMNIRKLEQTATSTHEAGIKPDDETQALMKLALSNGRIEAKGYDAEQKVEISTDLHPFIEQTLY |
1 | 4es8A1 | 0.06 | 0.04 | 0.73 | 0.71 | DisCoVER | | PDDLMNF-K--G---T--------WEVSADGSSGRFFSK--------GATDSYVFHLI--------PAKD--------------VKKPGWREHNEKDSYIKIDK--QSIAARYKTSTTAPYSVAF--KVN------TKLIDYKITFEQ--G--QI--AS-GITVDYRIGSAFDSFKISDESKYASNV--KIEGEEQGFKQREQGDKTISF--R--TLKEGPMSLVLLSKVEKKPQGDLDVEFKNLKIIDV-- |
2 | 2f3oA | 0.05 | 0.04 | 0.81 | 0.83 | DEthreader | | --------------LSVERCRLYVIPIQILDVGTMLIIFEGTIEFALEIAGISVAVYGRYSK--AEELA---ESEDG-ERREEL--KIAEICRVQLVQLHNY-----EQAISMILNLWIKTNE-IV-PA----FDSLLESGQATNAVTHRALFFDDA----------LINVIVVVGIQAVGIADVGDSVPKYSRLNSTDEGVTAVINSSKLSYELPNGA-S----LTINLLGDAVIEFNVRVAGWSAYFVES |
3 | 1qd7D | 0.04 | 0.02 | 0.56 | 0.64 | CEthreader | | ------------------------INPNKLELEERVVAVNRVVKGGRRLRFSALVVVGDK--------------------------------NGHVGFGTGKAQEVPEAI-------RKAIEDAKKNLIE-------------VPIVGTTIPHEVIGHFGAGEIILKPASEGTGVI--AGGPARAVLELAGISDILSKSIGSNTPINMVRATFDGLKQLK-------------------------------- |
4 | 2owyA | 0.09 | 0.08 | 0.85 | 0.97 | EigenThreader | | RLTQDLQLD--ADSLEKALGEKSARPCASQELTTYGFTAPFGKGPDAPLVFFLISARKEERILPGSVV--RDALKEKVDEIEAQQMRKVYLLPRAFSTFAAIAPSLGLILVD--SASAKKA----EDLLSTLREALGSLPVRPLSVKVALTDWVKTQEAALDECELRDT---------------------HEDGGVVRCKRQ----DLTSEEIQLHLTAG---KLVQLSLAWSDKLSFVLDDKLAVKRLRFE |
5 | 6qk7C | 0.08 | 0.05 | 0.64 | 0.27 | HHpred | | -----------------------------------------------NICVYCPGGPYTGYEP-TARYDPYE-QAR-G-RVE---QLKQ-LGHSIDKVE---------YVLMGGSLPKEYREDFIVKLHNAL---SGFNG------NDIDEAILYSQQSLTKCVGITIE-TRPDYCT---QTHLDDMLKYGCTRLEIGVQSLYEDVARDTRSVCETFAVSKDAGYVVSHMMPDPNVGME------------- |
6 | 2fpnA | 0.07 | 0.04 | 0.60 | 0.58 | MRFsearch | | --------EKEFYQKVQRLKQEYDWVIAREDKIKAIGTYTDK-----KNRTSFRLQLVTTLKK------------------------------HNPTSYLLYEQSL---------ETPDSWNDTYEQFER--------------------ETLGIFQVVIFTCLNGHLDD----NNIVLQKKANQLLNEFQVEHVVEP-------------------------NFVSISAFTDEWEEYITSKHKNLQIALRS |
7 | 5e71A1 | 0.10 | 0.06 | 0.54 | 0.53 | FFAS-3D | | -----------------------------------------------------------------------------------------------------------MLYVEILGNLPEMARDEVKAMLELGGGEIIGQDYLFLKVDAGEKAFPFLDRLGLAHEYGLLLVEADS-----VEELLQKAGEVEWGAFKVDTETMANCRHDVLDLPRKLGAVIHAQGRVNL----SKPDTVVRGERLYAGIRLRY |
8 | 2l82A | 0.08 | 0.05 | 0.62 | 0.56 | SPARKS-K | | IFVVFSSDPEILKEIVREIKRQ-------GVRVVLLYSDQDE-----------------------------------KRRRERLEEFEKQGVD-----------------VRTVE-DKEDFRENIREIWERY---PQLDVVVIVTTDDKEWIKDFIEERGV-EVFVVYNN-------KDDDRRKEAQQEFRSDGVDVRTVSD-------KEELIEQVRRFVRKVGSLEHHHHHH------------------ |
9 | 6qxlA | 0.11 | 0.08 | 0.66 | 0.63 | CNFpred | | -----------YPDLVKDCGV-GDELLLD-DGRVVMVVEEVA-----ADELRCRVLIGGPLSD-HKGINRR-GGGLT------APALTDKD---KADIKLAADMDLDYVAVSF--PRDAKDMEYARRLLTEAGG---KAWLVAKIE-DDDALDGLIRA--SDAVMVAR------------GDLGVEIG-----------------DAELVGIQKKIILHARRNNKVVITATQ-------------------- |
10 | 6wmuC | 0.06 | 0.05 | 0.81 | 0.83 | DEthreader | | ---DVPYLLSIQLDSFQK--Y-------------------GTFVITERVIVSQLHRSFFDSDLYNARIIPYRGSWLDRRRKLPAILDIDVMLVDDIDRRIRSVEITKRRISAAGEVDVHPTHYGRAFLETPYIHYL--VSQQVVSGADANRALMG--------PLVGTEVASGVSNQNTCINQDGPST-DLGELAQNMRVAMPWGNDSIGDKMA-GRHGNK-------LNPLGVPSMNIGQETPVF------ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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