Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | MFKNHLEMIGRNETASKKAKFWQSFVGSLKGSQDIRATDPIHTRPRGIFRPISDLPELGSGWPFGKSIYDDPIHAGERIHVPGYRYDPLHRDTYGYSPRPIYPHNYGSLDRYRPVFHITKPRPFDADKAWQDHIDRVKGREPSQWPSIFHTTYPFSRYPLYL |
1 | 1qabE | 0.05 | 0.04 | 0.85 | 0.61 | DisCoVER | | VKFSGTWYAMAKKDPEFLQDNI--VA-------------EFSVDGQMSATAKGRVRWDVCADMVGTFAKFKMKYWGVASFLQKGNDDHWIVDTDYDTYAVQYSCRLLNLGTCADSYSF-----VFSR-DPNGLPPEAQKIVAQ---RQEELCLAAQYRLIV- |
2 | 1llwA | 0.05 | 0.04 | 0.83 | 0.83 | DEthreader | | -CG-VGF--IANTLVEQALKALGCM-EHRGGCDSGAVLKNNQPHIEQI--DFYVC-SFSCRTI---VYKLGYLDLK--PKWPLAQP---LGHNGALLVFS----DGKIVGAGYCITDYIDLPEIKGRL-----IYSEDLLYDLHNHSNGPVLTDRAAGG--- |
3 | 3nvnB1 | 0.08 | 0.08 | 1.00 | 0.49 | CEthreader | | SEQAIGAIAASQEDGVFVASGSCLDQLDYSLEHSLSRLYRDQAGNCTEPVSLAPPARPRPGSSFSKLLREGAAGLGGLLLTGGACEVRPLGNLSRNSLRNGTEVVSCHPQGTSVYGTVVMNRTVLFLGTGDGQLLKVILGENLTSNCPEVIYEIKEETPVFY |
4 | 4widA | 0.02 | 0.02 | 0.98 | 0.53 | EigenThreader | | GAHQLVVTQIKLRVQRNRRLADEIIREQLTDIRKVFSDKFEKLEQGIQNSYLLLDKLKITKKDDIKDRVTYTC---MKYLLMAMQGTGGPVAFHVNNFTHLVALYKEGHQKNDEAMLGMHTPITMLSDQVRVLILYLIDEIVHAIHTNGLKPKVRIVINEFH |
5 | 4qwoA | 0.06 | 0.04 | 0.70 | 0.31 | HHpred | | -------------------AEWHKIIEDISKNNKFEDAAIVDYKTKNVLAAIPNRAKINPG--EVIPLITNHNILK--PLIGQKFCIVYTNSLLTGYPSPIVI--ARTHTA----LIFLGKPTTSRR-DVYRTCRDHATRVRAT------------------ |
6 | 1vhnA | 0.26 | 0.09 | 0.33 | 0.37 | MRFsearch | | -FERHLELLIKTRKAVVERKFLAGYTKDLKGARRFREK------------------------------------------------------------------------------------EVQILKEFYNFIKEVE------------------------ |
7 | 7abhT | 0.15 | 0.14 | 0.91 | 0.38 | FFAS-3D | | ------DVVEMHDVTAQDPKLL-VHLKATRNSVPVCFKRKYLQGKRGIEKPPFELPDFIKRT----GIQEMREALQEKEEKIDIDYQKLHDAFFKWQTKPIHGDLYYEGKEFETRLKEKKPGDLSDELRWLIAMQRY--GPPPSYPNLLNSPLYGDVFGT-- |
8 | 5yfpA | 0.06 | 0.06 | 0.98 | 0.81 | SPARKS-K | | SQKSYQAIVENW--NVSIQPVYMELWTKKISQLQGIDTNDEKMNELSL-SQLLNEWDTFRKERKTNDINPVFKNSFSLLTECLQTMRQECIVYQNFSKHNFEEYIKHFNDPDAPPILLDTVKVMQSDREAAVIETQLVSRIFQPIVTRSYFVELVKAEPTVA |
9 | 4eahA | 0.11 | 0.02 | 0.22 | 0.37 | CNFpred | | RLTQRMAGMAFL-MLTPQLNAIIAASASVKSSQKLK------------------------------------------------------------------------------------------------------------------------------ |
10 | 6ixhP | 0.06 | 0.05 | 0.84 | 0.83 | DEthreader | | ---------TTRYFFGGPLATTFGPVAL-SDMLNLQTYRTQVRLRQQIAGPQAMMQLLAQTV------------LTDTRDY--GSLTAAGLGQEWYFGQTVFRPM-QAWQQVLTPESLNAWRVWNFLYLNGLIADVAFTGLHFESRTEEGPLVLLLRNFVL- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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