>PF15928 (304 residues) EVIEQLDGKECLCCFWKIPDEGSHIPVYLTKYAQELTMTKYVPADDFHEEQEIPPILTPM EIKVEVEVDDDEEWVEEPEPETAAQREAREEAEMAEEEEFEEEEEEAAAAGPPEPPPMDM PPMDLGLDTVEEPELEEEDEEKHVEEAPKKRTRKITVQVPPIWVPTDHRTHAALIYIFFR PATTAFLPPDPKPEPPHVIMAFDAYKKKDLIAHAERNKVDVPLYGFFTSDDPDEAKFIAN SDIKYSQKEHTATDKLIFKVNKATSNTMLSLVTYGPSYVSPNTVIGRDEAKKFFPESYKT YEQE |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 | | | | | | | | | | | | | | | | |||||||||||||
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Seq | EVIEQLDGKECLCCFWKIPDEGSHIPVYLTKYAQELTMTKYVPADDFHEEQEIPPILTPMEIKVEVEVDDDEEWVEEPEPETAAQREAREEAEMAEEEEFEEEEEEAAAAGPPEPPPMDMPPMDLGLDTVEEPELEEEDEEKHVEEAPKKRTRKITVQVPPIWVPTDHRTHAALIYIFFRPATTAFLPPDPKPEPPHVIMAFDAYKKKDLIAHAERNKVDVPLYGFFTSDDPDEAKFIANSDIKYSQKEHTATDKLIFKVNKATSNTMLSLVTYGPSYVSPNTVIGRDEAKKFFPESYKTYEQE | |||||||||||||||||||
1 | 3rstA | 0.08 | 0.04 | 0.48 | 0.59 | DisCoVER | ----------------------------------------------------PSSKIAVLEVSGTIQDND---GYNHRFLKNLERAK-----------------------------DKTVKGIVLKVNSP------------------GGGVESAIHLPIYVSMGS--MAA----------------SG-GYYISTAAKIFAT----------------PETLTGSLGVI-GAHADIMSPSREMTKEE-VDSYDGRVYDGRAKKLNLVDEL----GFYTIMDLASVI--S----Y--------- | |||||||||||||
2 | 6s8bK | 0.10 | 0.06 | 0.61 | 0.67 | DEthreader | -------LWSSVSL----------ILFPSLRFNYAFYLLEKTKIFNGDDLFKIPPPIIPGRITLI--------LPGCFISKVKERYNEGWRKLIEGLRCYSERK-REDGFWN--------TPLNIRVKQ-------DEIFNNKL-----KIYNKRLVFK-----PSSMW------------------TPAWHV---LGDDLLAMLEVFESRRAAGFNGFPSLVGRSYSDSYNLLEEGKEIIRYKKDVAIFRYQT-----------------------------------------------TIE | |||||||||||||
3 | 1b4sA | 0.11 | 0.04 | 0.37 | 0.48 | CEthreader | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VNKERTFLAVKPDLVGEIIARYEKKGFVLVGLKQLVPTKDLAESHYAEHKERPFFGGITSGPVVAMVFEGKGVSARLMIGVTNPIGGSDSVESANREIALWFKPEELLTEVK | |||||||||||||
4 | 2vfvA | 0.04 | 0.03 | 0.76 | 0.75 | EigenThreader | LP-----SVVDVDTRVGGG---VRYAELARVVHARGSVATGRGDERFGGAVTSLGADLEYEMEQHVFT----ELPLAGLDPATFETVMA------------------------AAYWRAPGFRQDRPLDGFPYAAEKMHPVPGMPAVNCTEQFGVPGPWHERLPHFRA------------------EFTPSSGAELQSEYLMPREHALAALHAMDAIRETLAPEIRTVAADA------QWL------SPAYGRDTVAAHFTWVEDRLEEALVPFAA-RPHWGKVFTVPAGELRALYP-----RL | |||||||||||||
5 | 3j08A | 0.11 | 0.08 | 0.75 | 0.40 | HHpred | -----------------------ATPTALTVGMGKGAELGILIKNADALE-----VAEKVTAVIFDKLTKGKPEVTDLDERELLRLAAIA------------------ERRSE-------HPIAEAIVKKALEHGIEL-----GEPEKVEVIAGEGVVADGILVGNKRLMEDNEVELALEKLEREAKTAARN-GRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVIAVLPAKEVVAFVGDINDAPALAQADLGIAVGS-GSDVAV----------------- | |||||||||||||
6 | 6agyA | 0.16 | 0.06 | 0.38 | 0.25 | MRFsearch | ---------EQTFIAIKPDGVQGLIGPIISRFENR-----------------------GFKLVAMKLVSP--------PQSQLEQHYADLSDK-----------------------------------------------------------------------------------PFFKGLVSYML------SGPICAMVWEGRDVVKTGRTILGFAIDVGRNVCHGSDSVENAK---------------------------------------------------KEIALWFKPE------- | |||||||||||||
7 | 5x6oG | 0.11 | 0.10 | 0.92 | 0.45 | FFAS-3D | ETVGEFSSDD--------DDDIGTRPPRFTQIPPSSAATQIPTTLEVTTTTLNNKQSKNDNQVNQLNKAQGEASMDNIEREKEKNIQAVKVNELVKHLQELAKLKQELQKLEDEKKFLQRGKSKREVITNVKPPSTTLNTITPDSSSVAIEAKPQS--------PQSKKRKISDNLLLFLESILLHQIIGADLSTIEILFVIAKGAGKSIVSLLLRCKKTLTL----DRFIDTLLEDIAVLIKEISVHPNESKLAVPFLVA-----LMYQIVQFRPSATHNLALKDICDLIRIYHHVLKVPIHE | |||||||||||||
8 | 4r2jA | 0.10 | 0.08 | 0.77 | 0.59 | SPARKS-K | ------MYQNMLVVI---DPNQDDQP--ALRRAVYLHQRIGG------------------KIKAFLPIYDFSYEMTLLS-PDERTAMRQGVISQRTAWIREQAKYYLEAGVP-------IEIKVVWHNRPFEAIIQEVIAGSHDHDRLEAVIFTRKCPSPVWMVKDYHNALNEKLVKETLQLAEQVNHTE-----VHLVGAYPVTPRGQHLLAMKALRQKFSIVTHVEKGLP--EEVIPDLAEHLQ-------AGIVVLGTVFLGNTAEQVIDHCDLLVIKPDE-------------------- | |||||||||||||
9 | 5ktlA | 0.13 | 0.08 | 0.63 | 0.78 | CNFpred | ELAAHLVGTDTLVVCGTTGES-DEEYNLFVEVLQTVA---------------------KAKVIAGCGSN--------------------------STKEAIAATQKAAKI---------------------------------------------GVHGTLQVVPYYNKPPQAGLYQHFQAIAQACP--------DLPLLLYNVPGQNLSPETVVRLAEIDNIIGVMEASNLDQAGEIRRS--------TPKEFQIYAGDDS---LTLPLLAIGAKGVVSVASHLVGNQLQQMIQAFNSGQVTV | |||||||||||||
10 | 6rwbA | 0.03 | 0.02 | 0.62 | 0.50 | DEthreader | IDTIEIHELSLLPPSPLVEKLQT----L----Y--YFE------------------------WDKN------TLTLPTDDPDV--------------SREQSGLIKANYDRREQTQKNADKDAEQLAHQYTSQEQNMAKQLALEQHALYQTGKYNALSGLFQLFD---PLCLMFSGAGDLQLNLQKLENVWL--------TVSLAHLAV-----------------LNLEDYP----QISVSL-PA-----------LDYLAKGCTALAI--------FEGIDISDK-----RYTIR-S----- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |