Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | CSSYGCKLAFPSMQELMDHLKVHYIPTQSLEGKTFQCPTLGCTETFPSMQDLMAHMKVHYKPNRYFKCENCMLRFRTHRSLFKHLHVCSDSASSPAP |
1 | 1tf6D | 0.26 | 0.25 | 0.94 | 1.48 | HHpred | | CKEEGCEKGFTSLHHLTRHSLTHT------GEKNFTCDSDGCDLRFTTKANMKKHFNRFHNKICVYVCENCGKAFKKHNQLKVHQFSHTQQLPYECP |
2 | 5t0uA1 | 0.23 | 0.20 | 0.86 | 3.17 | SPARKS-K | | HKCHLCGRAFRTVTLLRNHLNTHT------GTRPHKCPD--CDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGE------ |
3 | 2rpcA | 0.31 | 0.29 | 0.93 | 1.18 | HHsearch | | EECPREGKSFKAKYKLVNHIRVHT------GEKPFPCPFPGCGKIFARSENLKIHKRTHTG-EKPFKCEFCDRRFANSSDRKKHMHVHTSDKSGPSS |
4 | 2jpaA | 0.22 | 0.21 | 0.92 | 1.40 | FFAS-3D | | CAYPGCNKRYFKLSHLQMHSRKH------TGEKPYQCDFKDCERRFSRSDQLKRHQRRHT-GVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSC- |
5 | 2ebtA | 0.25 | 0.22 | 0.86 | 1.90 | HHpred | | CDYPGCTKVYTKSSHLKAHLRTH------TGEKPYKCTWEGCDWRFARSDELTRHYRKHTG-AKPFQCGVCNRSFSRSDHLALHMKRHQN------- |
6 | 6jnlA | 0.30 | 0.26 | 0.87 | 3.14 | SPARKS-K | | CPIKGCGKNFFSHKYLVQHQRVHS------DDRPLKCPWKGCKMTFKWAWSRTEHIRVHTG-ARPYVCAECGQTFRFVSDFSRHKRKTGHS------ |
7 | 5v3jE | 0.26 | 0.24 | 0.91 | 1.18 | HHsearch | | YKCKECGKGFRRGSELARHQRAHS------GDKPYKCKE--CGKSFTCTTELFRHQKVHTG-DRPHKCKECGKAFIRRSELTHHERSHSGEKPYECK |
8 | 2ebtA | 0.25 | 0.22 | 0.86 | 1.34 | FFAS-3D | | CDYPGCTKVYTKSSHLKAHLRTH------TGEKPYKCTWEGCDWRFARSDELTRHYRKHT-GAKPFQCGVCNRSFSRSDHLALHMKRHQN------- |
9 | 2cotA | 0.26 | 0.19 | 0.70 | 1.06 | HHpred | | -------------------------EWQQRERRRYKCDE--CGKSFSHSSDLSKHRRTHTG-EKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSSG- |
10 | 1p47A | 0.24 | 0.21 | 0.85 | 3.00 | SPARKS-K | | CPVESCDRRFSRSDELTRHIR------IHTGQKPFQCRI--CMRNFSRSDHLTTHIRTHTG-EKPFACDICGRKFARSDERKRHTKIHLRQ------ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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