Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | ITPKSIFIAPQLNGFNGSLCPPDMKVDYNGKCIQVQSNINPADIVLTKLQSLLGDGGGVSNAGGNEDYDYEYDTSGPFQVNLPLSIDLPMEEPPKRAESFYDTMLVDVPSSLTTTTG |
1 | 3e6pL | 0.05 | 0.03 | 0.56 | 0.65 | DisCoVER | | VPDRGQQYGRLAVTTHGLPCL-AWAQAKLNVQLVEN---------------------------------------FCRNPEEGVW--CYV-AGKPGDFGYCD-----L--NYCEEA- |
2 | 1zd0A | 0.12 | 0.10 | 0.84 | 0.83 | DEthreader | | GE-ICISKVWLTDEQINKLFD-FKG-----DYQVV--NAECADKVIFATIIAIKAVEGRSIAKVPGELVSKV-KGENYIV-T-FGENA-ALLQKLSTLE-IKE-LEL---ERCD-AF |
3 | 4ourA | 0.10 | 0.10 | 1.00 | 0.62 | CEthreader | | IQPFGCMIAVDESSFRIIGYSEGIMILAMGTDVRSLFTSSSSILLERAFVAREIPVWIHSKNTGKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQALPGG |
4 | 1tt9A3 | 0.05 | 0.05 | 0.97 | 0.82 | EigenThreader | | KFLIAFNINLLST---KEQAHQGIGWEKNLAQVSTNLLDFEVTALLKALLDAAAFYCDKVLEEEHRIRLVVNRLGLDSFDPKERIIEYLVPDSGPEQSLLDASLRAFVREVGARSAA |
5 | 3alsA | 0.17 | 0.12 | 0.68 | 0.33 | HHpred | | ----------------LTSCPPLWTG-FNGKCFRLF-HIHSQAFLTELVKTSLPDAPGKVG-STNSDQTWTDGS--SVDYD----GWVSGEPNNGPN----SRGAIAAG-------- |
6 | 2pffB | 0.16 | 0.05 | 0.32 | 0.58 | MRFsearch | | -----------------------------GVRVIVAGTLKAAQDVWNRADNHFKDT-------------------NPVNLTIHFG-------------------------------- |
7 | 1dbdA | 0.09 | 0.07 | 0.74 | 0.34 | FFAS-3D | | ---------------------DGFHLAGGSCFALISGTANQVKCYRFRVKKNHRHRYENCTTTWFTVADNGAERQGQAQILITF-------GSPSQRQDFLKH--VPLPPGMNISGF |
8 | 7jtkA | 0.15 | 0.15 | 0.96 | 0.73 | SPARKS-K | | GGVSSIIVAVMYLQAEG-----GWTLRSVGDCHPFDSPGLIVPELKQTILNLRDHHGVQLDIDPAERVPVRAAEPAPLRIDLSWTFWPPPPPEEPPEEPMYNEEVQSISTGNREATG |
9 | 6c87A | 0.16 | 0.06 | 0.37 | 0.46 | CNFpred | | ---HDIYCCVTSF---HHVAPNGKYIA----IVSTTVESNPENEVKVVLDLLN---------------------------------------------------------------- |
10 | 1w27A | 0.07 | 0.05 | 0.76 | 0.83 | DEthreader | | -----------SSDW------MLINLLQGYSIL----------TPCLYIGLLGRNSSPEEAKLAGVGGFFEL-QPKGLVNGTGSASLFNILLAMILCALREEKVKVSVAKVLTMGVS |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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