Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | MSQQKQQSWEPPIAPKCSLPQRPNPSLAACSAPCHGPCSGGCDSGSQKPGEQRASSSRKAHRKKPCCLSGGTVYHIKEEEC |
1 | 2nbiA2 | 0.07 | 0.06 | 0.85 | 0.71 | DisCoVER | | CADVLELCPYDTCFPPDCT-----DPSVNRPDCDKLSFTCPTCCPTQCRPDN-PMFSPSPDGSPPVCSPTMMPSP------ |
2 | 2jozA | 0.05 | 0.05 | 1.00 | 0.56 | CEthreader | | QKEETPFYYGTWDEGRAPGPTDGVKSATVTFTEDEVVETEVQLPFMAYKVIQYLGPYYPLKSTLKRGENGTLIWEQNGQRK |
3 | 3f4bB | 0.01 | 0.01 | 1.00 | 0.63 | EigenThreader | | DAGFYNNLKNLANGREVQKSLTSRDGYLDAISKSSYGGGMSSAKAALESDTRVLAYYLGRKYLLSTDVGSVASYVDNGLNI |
4 | 1dvpA | 0.11 | 0.07 | 0.68 | 0.25 | HHpred | | -----AKGHTFPELREMFTADTAPNWAD---G-------RVCHRCRV-------EF--TFTNRKHHCRNCGQVFCCTAK-- |
5 | 7a5oA2 | 0.19 | 0.14 | 0.70 | 0.77 | MRFsearch | | ---GACVFWRTPCPIFCDYYNCGNRSFETCRTIISVSYLEGCYP---------------------RCPKDRPIYEEDLKKC |
6 | 1u34A | 0.12 | 0.12 | 1.00 | 0.29 | FFAS-3D | | MDSPDLGTTLLEQYCHRTTIGNFSGPYTYCNGTCWPQSAPGALVERPCPEYFNGIKYNTTRNAYRECLENGTWARVNYSHC |
7 | 3gawA1 | 0.08 | 0.06 | 0.73 | 1.17 | SPARKS-K | | ------TDCLSLPSFENAIPMGEKKDVYKAGEQVTYTCATYY----KMDGASNVTCINSRWTGRPTCRD------------ |
8 | 3u9uE | 0.30 | 0.10 | 0.33 | 0.77 | CNFpred | | -------------DRECH------PCHPNCTQGCNGPTSHDCIYYP----------------------------------- |
9 | 6d4hA | 0.07 | 0.06 | 0.84 | 0.83 | DEthreader | | -EGANTALQHDALSRLKWQRT-----V-------VVSVVLSFTTTTDDILKFSDVSVRVSGLMAYLTLSALDVSLGVLMLA |
10 | 1zlgA | 0.16 | 0.16 | 1.00 | 0.68 | MUSTER | | QRARCASRLQITRISAFFQHFQNNGSLVWCQNHKCSKCLEPCKESGDLRKHQCQSFEPLFPKKSYECLTSKYILLVKQGDC |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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