Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | SRGEAAGVDRGKAGLGLGGRPPPQPSRDERAQQLLDAVEQRQRQLLDTIAACEEMLRQLGRRRPEPAGGGNVSSKPGAPPQPAVCARGGFPKDAGDGAAEP |
1 | 3zifN | 0.15 | 0.06 | 0.40 | 0.68 | DisCoVER | | -----------------------------------------------------GS--VQ--DKTGSNMLGGVVL---PPNSQAHTEATRDNLHAEGARPE- |
2 | 2a0uA | 0.15 | 0.13 | 0.86 | 1.00 | DEthreader | | VLDIAAGIAF-TSCDFV--RKAVLVAFVELAEAVYTNDVAFNEGIRHGAAHILAAAKAEGRDKVS-----ILTI------TALVYACGTVGNKIGYFITSI |
3 | 4rs6A | 0.05 | 0.05 | 1.00 | 0.51 | CEthreader | | LPDKKTVHYYAELGQCSVFPATDAPEQFISQVTVLKYFSHYMEENLMDGGDLPSVTDIRRPLQWLKSDKALMMLFNDGTFQVNFYHDHTKIIICSQNEEYL |
4 | 5mq4A | 0.08 | 0.08 | 0.94 | 0.50 | EigenThreader | | TTGSTIAEIRRLRIEIEKLQWLHQQELSEMKHNLELTMA------EMRQSLEQERDRLIAEVKKQLELEKQQAVDETKKKQWCANEAINTSYCDYPCQQAH |
5 | 1vgmA | 0.16 | 0.13 | 0.81 | 0.26 | HHpred | | -----EKIIKGSRLMGFGHRVY--KTYDPRAKIFKTLAKSFVKKYYEIAERIEKLGVDTFSKHIYPNTDFYS---------GIVFYALGFPIYMFTSL--- |
6 | 6b1tR | 0.23 | 0.14 | 0.59 | 0.40 | MRFsearch | | ---PWAGVRQNVMGSSIDGRPVLPLARDDKLTALLAQLDSLTRELNVVSQQLLDLRQQVSALK-------------------------------------- |
7 | 5xtcp | 0.14 | 0.11 | 0.79 | 0.43 | FFAS-3D | | ---QPYIFPDSPGGTSYERYDCYKVPHPSEKAMYPDYFAKREQWKKLRRESWEREVKQLQEETP--------PGGPLTEALPPARKEGDLP---------- |
8 | 6thhC1 | 0.12 | 0.12 | 0.96 | 0.60 | SPARKS-K | | NKFSKNEEDYIRKGLGINEKSLKYLLNIGDVQKALDKILELLEKRYAEQSSDKTLLYYVKF----SSSGNIIDDLPKITDRPNVVCGPIYSSNPVRFVQVR |
9 | 3pdyA | 0.19 | 0.07 | 0.36 | 0.36 | CNFpred | | ------------------------PATRGAYRDCLGRLDLQYAKLLNSSKARLRSLESLH----------------------------------------- |
10 | 1ciiA | 0.07 | 0.06 | 0.84 | 1.00 | DEthreader | | QAADKAADMLAEYRGLRLLEKNGLAVDAQQARLLGQQTRNDRAISEARNKLSSVTESLNTARNTREQTQKNKVSPEDNLNYLLSH---------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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