Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | MEQHTSNPTKEEAKEEDNVVCLCRAKPSPSYINLQANSPPATFSNTETTMLPSGAGEKPKECLGLLECMSANLQLQTQLAQRQMAILENLQTSLSQLGSGRESKTCSLPGLCCNLLLNHLPQFHK |
1 | 2jpfA | 0.09 | 0.05 | 0.55 | 0.67 | DisCoVER | | ---------------NLDVKWLD------RAGSQGDVK----VWMQNLEDLHTRRPDEF---TA-RLQQS-------------------TDALYSHLEAAKQHGPPTAVVGMPQWQE-------- |
2 | 6lcpA | 0.05 | 0.05 | 0.93 | 1.00 | DEthreader | | FPRNKIRTHMAGIT-PSK---I-DVGMYQPCIPKS-NIDD-VGQIEAGIKLWVLGLIFR-FLQRLVLVHGWSYRRLAETISNFFYKNMIWTWSIFWYQCNFD-IAYIFEYYILMFNLFFTSVPNG |
3 | 1ge9A | 0.06 | 0.06 | 1.00 | 0.49 | CEthreader | | FKEAEKDMKKAVEYYKNEIAGLRTSRASTALVEETISVPEHNQIVIQREELNLNPTRVTLPPLTEERRRELVRLLHKITEEARVRVRNVRREAKEMIEELEGISEDEKKRALERLQKLTDKYIDE |
4 | 1q8kA | 0.05 | 0.05 | 1.00 | 0.55 | EigenThreader | | LSELSRIRSINKLIRIGRSKCEDKFTKSKTVYSILRHVAEVLLFQRTAWVFDDKYKRPGYGAYDAFKHAINNINRRLEGIDAVKEALRAGLNCSTTTTLERTEGLSVLSQAMAVIKEKIEEKRGV |
5 | 5c3lA | 0.16 | 0.10 | 0.62 | 0.22 | HHpred | | ---------------------------SPVQIKQLIQNPLSGVDPEQAKVDNPDPRLIPVPMIG-FKELLRRLEVQDQMTKQHQSRLDIISEDIGELQ-KNQTTTM------------------- |
6 | 1vt4I | 0.27 | 0.11 | 0.42 | 0.35 | MRFsearch | | ----------------------------PKYERL------------------------VNAILDFLPKIEENLLLRIALMAEDEAIFEEAHKQVQRGGGGGGGG--------------------- |
7 | 5lnks | 0.10 | 0.07 | 0.73 | 0.43 | FFAS-3D | | ARRYLGDASVEPEPLRMPTFP-----PDYGFPERKEREMVATQQEMNDAQLVLQQRDYCLKCKDWDYCEHLDYVKRMKEFERERRLLQRKKRREQR----------------------------- |
8 | 5dooA2 | 0.12 | 0.10 | 0.82 | 0.67 | SPARKS-K | | -----------EFDNLKDFYTTFNIRPISPENKIDLNNEQENISFYYENLPEPFISTTSAIMKAILYVYAENIRL-EQVAKEAFKKLQDFLATLEQHFITLIFQGYLKIFETKP----------- |
9 | 3vycA | 0.06 | 0.03 | 0.52 | 0.42 | CNFpred | | ----------------------------------------------------------PAAFKLFVDAICWAFKHNRDVEVNGLQIALDLVKNIERMGNVPFANE--FHKNYFFIFVSETFFVLT |
10 | 5yfpE | 0.11 | 0.10 | 0.87 | 1.00 | DEthreader | | --------------YSM-GKSDNLKSEFNGGVHLQRFLCFADFSLYDRSGLYLEEAQEMTNSQIQKMEILINIILQETITVISTKFSAILCKQKKKDFVPKSQELLDQ-DTLPAIIVNILNLIFQ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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