>PF15834 (196 residues) VWVSLYFGFLGLCSVVTGGCILFLHWRKNLRREERAQEWVEVMRAATFTYSPLLYWINKR RHYGMNTAINTGPPPTVTKTETEVQNADPLWELDIPESRSSAAQDSSPKVEVPTLLQPPL QPLPSPMLPSHTSDPVPIPVFQEVPFAPSLCNLPPMLNHSVSYPLDTCPERNVHFHSLPT MAHGDHCFSTKPLASE |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | VWVSLYFGFLGLCSVVTGGCILFLHWRKNLRREERAQEWVEVMRAATFTYSPLLYWINKRRHYGMNTAINTGPPPTVTKTETEVQNADPLWELDIPESRSSAAQDSSPKVEVPTLLQPPLQPLPSPMLPSHTSDPVPIPVFQEVPFAPSLCNLPPMLNHSVSYPLDTCPERNVHFHSLPTMAHGDHCFSTKPLASE | |||||||||||||||||||
1 | 4x7uA | 0.04 | 0.03 | 0.80 | 0.57 | DisCoVER | VAYPTVAHTMIGMKRLNNLCVESAVPG------------D--VL--ETGVWGGACIFARGILRDRTVWVADS--F----QGFPLHQYNEAV-DLPTSLATVQRN---FSRYLLDQVRFLPGWFKD-TM-----PTAPFERL-AVLRMDGDSYTMDVLTHAYRLSP--GG---FAIIDDYCIPACREAVQGVYWRR- | |||||||||||||
2 | 3ahcA | 0.07 | 0.05 | 0.72 | 0.67 | DEthreader | -RVTNYSIWGTTPGLNFLLAH-INRLIADHQ-QN--T--VF--I---MG-P---G-HGGPAGTSQ-----------SY---TYTEYPTKDGLQKFFRQFSYP----G-GIPSHAPEGELGYALSHAGAVNPSL--F-------IIGILHLNAFVAGDHM-------IHRRFELFLIFRTPKG--SWRAHQVPLAAR | |||||||||||||
3 | 1vt4I3 | 0.04 | 0.04 | 1.00 | 0.52 | CEthreader | LICSKYTDLLRIALMAEDEAIFEEAHKQVQRGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG | |||||||||||||
4 | 5tsjN | 0.07 | 0.07 | 0.97 | 0.50 | EigenThreader | ALKVYILNWMVFWTVVWGLIYGEFFGTLLILLSVAFGVVMVFAGLILRAYLGLKH------RHMAHFWEGVGYLGGLLGILALAASYLGNLQAGWLSALMYLGFGVFLLSVVMSSIWLMIPIRIYAVGAAGGILAGLLTDVGFAMAERLGLIGVLLGIVVAGVLHLLILLLTTLGHMLQPIRLIWVEFFTKFGFYE | |||||||||||||
5 | 5o31Z | 0.18 | 0.08 | 0.45 | 0.30 | HHpred | RGLSGYSMFAVGIGALLFGYWSMMKWNRERRRLQIE------DFEARIALMPLLQAEKDRRVLQMLR--------ENLEEEATVMKGGGGGGGGGGG-----GGGGG----------------------------------------------------------------------------------------- | |||||||||||||
6 | 3rhwA2 | 0.14 | 0.04 | 0.29 | 0.28 | MRFsearch | --IKAIDVWIGACMTFIFCALLEFALVNHIANAKRVDLISRALFPVLFFVFNILYWSRF----------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
7 | 2akhY | 0.10 | 0.10 | 0.96 | 0.41 | FFAS-3D | --LIVFRIGLGIMPYISASIIIQLLTRRKISQYTRYGTLLAIFQSIGIATTMFLMWLGEQTERGIGNGISI-----IIFAGIVAGLPPAIAHTIEQARQGDLHFLVVERGQRRIVVNYAKRQQGRRVYAAQSTHPLKVNMAGVIPFASSIILFPATIASWFGGGTGWNWLTTISLYLQPCFFYTALVFNPRETADN | |||||||||||||
8 | 3jc8Na | 0.07 | 0.07 | 0.91 | 1.01 | SPARKS-K | RQVLVLFAVVLIGAGVANYLWYDDRQSELEAHQAGVASTKARIAELEKIIGEVKNINTRKAEVELDALRKGRSGPVRMMDALASATPKKVWVKTFENNNAVSIDGSAVSHDEWTPKGMGDSKTARVEMLTSDATIEEFPEAQVSPF------FKNIDLQTAKQVGGAQVGVPILVEFKITMTSNY----------- | |||||||||||||
9 | 4u95A | 0.19 | 0.06 | 0.29 | 0.60 | CNFpred | --VYFQVGLLTTIGLSAANAILIVEFAKDLMDKEGKGLIEATLDAVRMRLRPILMTSLA----------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
10 | 6yufD | 0.08 | 0.07 | 0.80 | 0.67 | DEthreader | IEAENISIILVKLLVLFIIILKVAHEVTYLFRLRLICEEYRATIRQF-MNVM---------NDIIS----NKWFSLYHSFLNLK-FFVSLIIGFLDSSKSNDRCSGISDRKLTRSNVLLVVFSRYLLKPY--SFLRSLES-------------TATLMEVPCL-S----TRLNDYRLK-IVVCLKSGDLRIN---- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |