Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | MPEETQEDSVAPMMPSQRSRGPLAPNHVHEVCLHQVESISDLHSGGTLRPYLTEEARPWDELLGVLPPSLCAQAGCSPVYRRGGFLLLLALLVLTCLALALLAVYLSVLQSESLRILAHTLRTQEETLLKLRLASLSQLRRLNSSEAQA |
1 | 2d4uA | 0.07 | 0.06 | 0.91 | 0.59 | DisCoVER | | NCKENFTVLTIRQQ-----QSTLN-GSWV--ALQTRNTLNRAGRYMMSTVLMESASISLKQAEKNWADYEALP----RDPRQSTAAAAEIKRNYDIYHNALAELIQLLGAG-KINEFFDQTQGYQDGFEKQYVAYMQNDRLHDIAVSD- |
2 | 5twvB | 0.06 | 0.05 | 0.78 | 0.83 | DEthreader | | ------------DAIAKLPIMRA-L---TNYQR--LCVAFDAQARKALAFGRRLI----------S---STFRILAQRTFLQASYYVAIETGINLRGAIQTKIYNKMH--RYEARFQQKLLEYTDSNNIASLFLTAANRWLEVCMEYGA |
3 | 3b4rA | 0.10 | 0.10 | 1.00 | 0.39 | CEthreader | | YVAKKYGVKIEKILLLPIGGVAMMDKIPKEGELRIGIIIGIVLLIVSQFFDININGYPLLYTLSLLNLMLGGFNLIPAFPMDGGRILRAILSKKYGYLKSTKIAANIGKSLALIMLLFGLLSMNIILILVSLFVYFGAEQESRVVEVET |
4 | 6fkfb | 0.10 | 0.09 | 0.98 | 0.58 | EigenThreader | | VLGVLIFFGKGVLSDLLDNRKQRILNTIRNSEELRGKAIEQLEKARARLKKVEMDADQFRVNGYSEIEREKMNLINSTYKTLEQFENYKNETIQFEQQKAINQVRQRVFQQALQGALGTLNSC---LNNELHLRTINANIGMFGAMNEI |
5 | 6r3qA1 | 0.16 | 0.07 | 0.46 | 0.30 | HHpred | | -------------------------------------------------------------------------QYCNFCQWMRSSLATVVGAGILVFFLLLLLVWFLNREFEVSYRLHVEADLHRTKIQSMRDQADWLLRNI------- |
6 | 3jc8Na | 0.14 | 0.07 | 0.53 | 0.45 | MRFsearch | | -----------------------------------------------------------------LPVRAVKKR-----EMGRQVLVLFAVVLIGAGVANYLWYDDRQSELEAHQAGVASTKARIAELEKIIGEVKNINTRKAEVEKKL |
7 | 6b87A | 0.21 | 0.09 | 0.44 | 0.54 | FFAS-3D | | ----------------------------------------------------------------------------TEIRELERSLRLQLVLAIFLLALLIVLLWLLQQLKELLRELERLQRESDEDVRELLREIKELVENI------- |
8 | 5yfpE | 0.12 | 0.11 | 0.92 | 0.74 | SPARKS-K | | --SLYELDPKWKKLLKTDNLGGLTVNEF----------VQELSKDHRNDVLIDANTKNLPTNEKDQDAIREAIWKQLPKPYIRTFESTLKELKNLNEETLNKRQYFSEQVATQEVIHSENVIKLSKDLHTTLLTFDKLDDRLTNVTQVV |
9 | 6ajiA | 0.10 | 0.05 | 0.45 | 0.53 | CNFpred | | ----------------------------------------------------------------------------------QPVVTLIGLGIAIDYGLFIVSRFREEIAYDTEAAVRRTVMTSGRTVVFSAVIIVASSVPLLLFPQGF |
10 | 4f61I | 0.08 | 0.07 | 0.85 | 1.00 | DEthreader | | ERVIAIEENNNIKMELAMESENEA--AA--ERLEK--H---V----RAINNNIKMAKE--A-M---K---KYEAELLKHLAEKREHEREVIQRAIEENNNWIKMAKEKLAQKMESNKENREAHFAAMLERLQEKDKHAEEVRKNKELKE |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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