Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40
| | |
| Seq | PEKRRTLEHYLKLKSSGWIQDGSGKWVKDENVEFDSDEEEPPMLPP |
1 | 4gdzA | 0.02 | 0.02 | 0.98 | 1.00 | DEthreader | | AADAVSYDDAVAALKAQQFVLANFVLVNQG-RGTQGISAQIFLTLT |
2 | 6kyvB1 | 0.02 | 0.02 | 0.91 | 1.00 | DEthreader | | IIAQLMRDTESLAKRICKLLSIWIVQAC----FQMKESCKLFYTHR |
3 | 4x36A4 | 0.18 | 0.07 | 0.37 | 0.75 | DisCoVER | | -------------LADRWRKHTDGNWYWFD---------------- |
4 | 3fyfB | 0.07 | 0.07 | 0.98 | 1.00 | DEthreader | | QQDSVSYVQAINALKNGSFVLANYVEVNDG-QGNINGSATVSIVLT |
5 | 6f8eA | 0.07 | 0.07 | 1.00 | 0.61 | CEthreader | | IRMKKVMQYRRALTTVKVTCSKDGEEVQWFKGKSTAGAQDRKKPSG |
6 | 6jnfA | 0.09 | 0.09 | 0.93 | 0.57 | EigenThreader | | DFSVNAGVSYLTRYVDWIFSGGALIASLW---RKVAQNVEAGVEGS |
7 | 4nnaA1 | 0.19 | 0.13 | 0.70 | 0.29 | HHpred | | SN-KLARRIVLQLTTYGWIVSEQGDLLWEHRQH------------- |
8 | 4nnaA1 | 0.21 | 0.13 | 0.61 | 0.58 | MRFsearch | | --ADRCASIAADLKTDGWEVVPAGGRLLQV---------------- |
9 | 1mc4A4 | 0.31 | 0.26 | 0.85 | 0.29 | FFAS-3D | | --GSYTEKVYPALRQAGW----KGYWI-DAASTLRMDKEAIITLDP |
10 | 2n0pA | 0.22 | 0.22 | 1.00 | 0.83 | SPARKS-K | | ELTPQELELFKRAMGITWARTNNFKLLTDEWVWVEGYEEHIGKQLP |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|