>PF15799 (581 residues) DPYRRPARRTQWLLSALAHHYGLDRGVENEIVVLATGLDQYLQEVFHHLDCRGAGRLPRA DFRALCAVLGLRAEGAAAGEASGDAAARDANPGDAAAGDAAAGVATDGDADAEEEARLAL RAEPPELTFRQFHARLCGYFGTRAGPRLPRGALSEHIETQIRLRRPRRRRRTPHTPGPDG GPDCPDGGRDGERLARLEEENGSLRELVEDLRAALQSSDARCLALQVGLWKSQAGAQEAG RVGPEVAARELRQARGALAVAEARAGRLRQGQVEVRRRAEEAREAVLRSLGRVRELEALA RQVPGLQRWVRRLEGELRRYRSEGTQLPISSRGSPEPEAKSGEPEESGTRSPDTSPEGAW QSDSSSGNRPLDEVDGQLFRSVEGQAASDEEEEAQKCQEEQRSLAKVKTLLARLSSCRSG CDEQTAKKLVTYFGHFGSADHACNLGELEARIAVLVEQTLGTPGEEAELQRKVEENEQLR LELQMVETERVRLSLLEEKLVDVVQLLQRLRDLNISKRALGKILLNTLDACKDPTHEGRS GPSAILDALHTALAGCELLRREPSAPASTAPALANPLLISC |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520 540 560 580 | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | DPYRRPARRTQWLLSALAHHYGLDRGVENEIVVLATGLDQYLQEVFHHLDCRGAGRLPRADFRALCAVLGLRAEGAAAGEASGDAAARDANPGDAAAGDAAAGVATDGDADAEEEARLALRAEPPELTFRQFHARLCGYFGTRAGPRLPRGALSEHIETQIRLRRPRRRRRTPHTPGPDGGPDCPDGGRDGERLARLEEENGSLRELVEDLRAALQSSDARCLALQVGLWKSQAGAQEAGRVGPEVAARELRQARGALAVAEARAGRLRQGQVEVRRRAEEAREAVLRSLGRVRELEALARQVPGLQRWVRRLEGELRRYRSEGTQLPISSRGSPEPEAKSGEPEESGTRSPDTSPEGAWQSDSSSGNRPLDEVDGQLFRSVEGQAASDEEEEAQKCQEEQRSLAKVKTLLARLSSCRSGCDEQTAKKLVTYFGHFGSADHACNLGELEARIAVLVEQTLGTPGEEAELQRKVEENEQLRLELQMVETERVRLSLLEEKLVDVVQLLQRLRDLNISKRALGKILLNTLDACKDPTHEGRSGPSAILDALHTALAGCELLRREPSAPASTAPALANPLLISC | |||||||||||||||||||
1 | 4l3iA | 0.15 | 0.11 | 0.69 | 1.24 | FFAS-3D | -------RRSEVLAEESIVC-----------------LQKALNHL-----------------REIWELIGIPEDQRLQRTEVVKKHIKEL-----------------LDIAEEESLKERLIK-----SISVCQKEL------------------NTLCSEL-----------------HVEPFQEEGETTILQLEKDLRTQVELRKQKKERKQELKLLQEQDQELCEILCPHYDIDSASVPS-----LEELNQFRQHVTTLRETKASRREEFVSIKRQISFERDVVLENIATLQKLLRQLEQKSQNEAVCEGLRTQIRELWDR---------------------------------------------LQIPEEEREAVATISGSKAKVRQLEVDRLEELKQNKKVIEAIRVELVQYWDQCFYSQEQR-QAFAPFCAEDYTESLLQLHDAEIVRLKNYY----EVHKELFEGVQKWEETWRLFLEFERKASDPLLKEEKQRAKLQKLPKLE------EELKARIELWEQEHSKAFVNGQK-FEYVAEQWEHRLEK-ERAKQE------------------- | |||||||||||||
2 | 2ot8A | 0.10 | 0.07 | 0.68 | 1.05 | CNFpred | ------KESGILVLGAIAEGCMQ---------GMIPYLPELIPHLIQCLSDK-KALVRSITCWTLSRYAHWVVSQPP-------------------------------DTYLKPLMTELLKRIL--DSNKRVQEAACSAFAT----------LEEEACTELVP--------------------------------YLAYILDTLVFAFSKYQHKNLLILYDAIGTLADSVGHHLNKPEYIQMLMPPLIQKWNMLKDLFPLLECLSSVATALQSGFLPYCEPVYQRCVNLVQKTLAQAMLNNA-KDFMIVALDLLSGLAEGLGGNIEQLVAR-----------------------------------------NILTLMYQCM-----QDKMPEVRQSS-----FALLGDLTKACFQHVKPCIADFMPILGTNLNPEFISVCNNATWAIGEISIQMGIEMQP------------YIPMVLHQLVEIINRPNTPKTLLENTAITIGRLGYVCPQEVAPLQQFIRPWCTSLRNIRD-----NEEKDSAFRGICTMIS--------------------------- | |||||||||||||
3 | 2f33A | 0.07 | 0.03 | 0.41 | 0.70 | DisCoVER | ----------------------------------------MAESHL-QSSLITASQFF--EIWLHFDAGYLEGELQNLIQELLQARKKAGLELSPEMKTFVYGQRDDG---KI-GIVELAHVLP--TE--E-----------------------------------------NFLLL------FRC--------------------------------------------------------------------------------------------------QQLSCEEFMKT--------------------WRKYD-TDHSGFIETEELKNFLKDLLEKANKTVDTKLAEYTDLMLKLFDSNNDGKL--ELTEMARLLPVQEN---------------------------FLLK-FQ------------------------------------------------------------------------------GI--KM-CGKEFNFYI---DENELDALLKDLCE--KNKQELDINNISTYKKNIMALSDGGK----LYRTDLALILS-AGD-- | |||||||||||||
4 | 4zhjA | 0.05 | 0.03 | 0.62 | 0.67 | DEthreader | -ITV-SF-PPDKG--N------------------------VGT-AAYLDVSIYAKLMVI----------------ENW--P--HLNSDGNLLIYQPTFGY-GDSRSAS--------YTLAAVLHF-T-----------------NLYYYA---------------------ANNPSEATIAKRRGYAS-----TI-S------T------P--AE-NAGLYK-L-------------C-IERLLPCGLHV------------------------EAIATLVNIASLDRAPMEEIYRNSDKGLV--LQDITLATRAVAALV-EQ------VSFVSKLFFKA-WVKSLCDSGYPNVN---------------------------GGDPIRNNVIHALDPQSIPTL-AAVQSAKVVVRLSVLWDNSLAQIMWGAKPVELVPLEELGRPRIDVAVKLAAEADRL-AEMGIGVREAATRIFAFALKAATFQYSDTKLV-AKLEGVRELSKRL--T---DNWVYEDANSTF--D---E-----MCKRLMDLNPNSFRRMVSTLEVNGRTSDENLERLQE-------- | |||||||||||||
5 | 6sl2A | 0.09 | 0.08 | 0.95 | 0.98 | CEthreader | ---------------------------AMADSELVAQWEKVQIKTFTKWVNMKKGRKINDVTTDFKNGVELCALLEIIGETTIKCVTNPKMRIQMTENLDKALRFIQSRDVKLTGIGPTDIVDGNVLTLGLVWTLILRFAISELSAEGLSAKQGLLLWCQKKCEPYPVKVENFSESFKDGKVFCALIHRHRPDLLDWETVGEDDRANLEKAFDVAEKELGIPKLLDVDDIVNMPRPDERSV-MTYVAALYKVFSSNDQVEKAGKRAGNFLDLLRATEGMVHDYEQRAQALENIEAAINKMNGVSDEYHQVKEQINETKNYRKGDRAFIKEQGDLATLFGQINSLRGMKRPVYVAPEGLDPKSLEGNISEAERALRSKLNTAMRNCLIALRKAFADPANATDAKINEYRTFVTDETSEAPLEEQVATLAKLEELQVEAQLPPIEEAEKACGDANIEDNEYTDVSFDDLQFNYEQTVSMFEKIVYIEAQINEASSGVTAEQMQEFKQSFDAFDGNHDGI--LDLEFRSCLSSMGLIDIDFTGGEDAQYDAIYNNVTGENGVSFDNYVQYMENDENPSPEQLNE | |||||||||||||
6 | 6gmhQ | 0.08 | 0.08 | 0.97 | 0.92 | EigenThreader | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG---GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGVEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFALPFFGLGQMYIYRGDKENASQCFEKVLKAYPNNYETMKILGSLYAASEKRDIAKGHLKKVTEQYPDDVEAWIELAQILEQTAYGTATRILQEKVQADVP---PEILNNVGALHFRLGNLGEAKKYFLASLDRAKAEAEHDEHYYNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHLAKQEPSTQSDTYSMLALGNVWLQTLHQPTRDREKEKRHQDRALAIYKQVLRYAANGIGAVLAHKEARDVFAQVREA----TADI-----SDVWLNLAHIYVEQKQYISAVQMYENCLRKFYVLYLARALFKCGKLQECKQTLLKARHV | |||||||||||||
7 | 6jlbA | 0.19 | 0.06 | 0.31 | 0.42 | HHpred | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IDRVRSLETENAGLRLRITESEEVVSREV-S------GIKAAYEAE-------LGDARKTLDSVAKERARLQLELSKVREEFKELKARNTKKEGDLIAAQARLKDLEALLNELHDLRGQVAKLEAALGEAKKQLQDE--------------------------------------------------LRRV---------D--AENRLQT-K--EELDFQK---------------N----I--------Y---SEELR--------------ETKRRHETRLVEID----------NGKQR--EFESRLADALQ---------------------------------------------------------------------------- | |||||||||||||
8 | 3lijA | 0.13 | 0.07 | 0.53 | 0.45 | MRFsearch | --EVDAAVIIKQVLSGVTYLHK-----DALIKIVDFGLSAVFPEVLRKK------YDEKCDVWSIGVILFI----------------------------LLAGYPPFGGQTDQEILRKVEKGK---------------------------------------------------------------YTFDSPEWKNV---SEGAKDLIKQMLQFDSQRRISAQQALEHPWIKEMCSKKESLPSLANAIENMRKFQNSQKLAQAALLYMASKLT--------------------------------SQEETKELTDIFRHIDKN---------------------------------------------------------------------------------------------GDGQLDRQELIDGYSKLSGEEVAVFPQIESEVDAILGAADFDRNGYIDYSEFVTVAMDRKSLL----------------SKDKLESAFQKFDQDGNGKISVDELASVFLDEMISGIDSNNDGDVDFEEFCKMIQKLCS--------------------------- | |||||||||||||
9 | 2tmaA | 0.13 | 0.06 | 0.49 | 1.18 | FFAS-3D | ----------------------------------------------------------------------------------------------------------------------------------------------------------DAIKKKMQ--------------------------MLKLDKENALDRAEQAEADKKAAEDRSKQLEDELVSLQKKLKGTEDE--------LDKYSEALKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKLE---EAEKAADESERGMKVIESR------------------------------------------------------------------AQKDEEKMEIQEIQLKEAKHIAEDA--------DRKYEEVAR------------KLVIIESDLERAEERA---ELSEGKCAELEEEIKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLSKLKEAETRAEFAERSV-TKLEK----------SIDDLEDELYAQKLKYKAISEELDHALNDMTSI-------- | |||||||||||||
10 | 7abhu | 0.09 | 0.09 | 0.94 | 0.86 | SPARKS-K | NMDEYVRNTTARAFAVVASALG---------------IPSLLPFLKAVCKSKKSWQARHTGIKIVQQIAILVDEQQKVRTISAAEAATPYGIESDSVLKPLWKGIRQHRGKGLAAFLKAIGYLIPLMDANYYTREVMLILIREFQS---PDEEMKKIVLKVVKQCCGTDGVEANYIKTEIHFWQHRMALDRRNYRQLVDTTVELANKVEQYRKMVMETIEKIMGNIDGILYAFQEQTTEDSVMLNGFGTVVNALGKRVQICGTVLWRLNNKSAKVRQQAADLISRTAVVMKTGVVLYEYLGEYPEVLGSILGALKAIVNVIGMHKMTPPIKDLLPRLTPILKNRHEDRGAEYVSAREWMRICFELLELLKAHKKA----------IRRATVNTFGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALVHRQTASAVVQHMSLGVYCEDSLNHLLNYVWPNVFET--SPHVIQAVMGALEGLRVAI-----GPCRMLQYCLQGLIYNSIYIGSQDALIAHYPRIYNDDKNTY | |||||||||||||
|
|
References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |