Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| Seq | VVPIPVQIFLWRQTTPFVRPRLGKVHDAACMFCQRAPGHHSFEKVLVQNLRFGLSISLAEAIESIPRWRLIQASLPHVMHALAALLHNRVKDNMQSLGNVETKLLYTLHWILLDASDECIESDYENGIFYSNPFHYLFSIPALTLFVFLFAPLSHHLKESDFTNNYRLENGLKMWQAMWEFRHPEAPCFTTLVKPK |
1 | 2fozA | 0.06 | 0.05 | 0.84 | 0.61 | DisCoVER | | CLGALLGDVFEPARAQGSY--GNGGAMRVAGISLAYSVVQFARLSAQ------LTH-A---S----SLGYN---G-AILQALAVHLALQG---ESSSEHFLKQLLGHMEDLEGQSVLDARELGMEERPYRVVELGNGIAAFE--SVPTAIYC--FLR-C-MEPDEIPSAFNSLQRTLIYSISLG-GDTTIATMAG- |
2 | 6rkoA | 0.04 | 0.03 | 0.74 | 0.83 | DEthreader | | -FWGLFGINFALVAGLTMEFQF---------PLAIE-GLMAFFLE--S-----TF--VGLFFFWK--MCVTWLVALGSNLSALWILVANGWM-QNPPVAQVKFVHTVASGYVTGAMFILGISAWYMLKG----------------------A--FGMAAVLSVIVLGDIFMVACGFLLLAIIAF---PWIAELLMF |
3 | 6h7dA1 | 0.08 | 0.08 | 0.90 | 0.54 | CEthreader | | ---VTAFVIMTCIVAAMGGLLFG-YDLGISGGVTSMEEFLTKFFPQVESQMKKAKHDTAYCKFDNQMLQLFTSSLYLAALVASFMASVITRK------HGRKVSMFIGGLAFLIGALFNAFAVNV---------SMLIIGRLLLGVGVGFANQSTPVYLSEMAPAKIRGALNIGFQMAITIGILVANLINYGTSKM |
4 | 4y21A | 0.07 | 0.06 | 0.93 | 0.70 | EigenThreader | | HGALERDKKDGFQQTSEHALFSCSVVDVFSQ----------LNQSFEIIKKLECPDPQIVGHYMRRFAKTISNVLLQYADIVSKDFASYC---SKEKEKVPCILMNNTQQLRVQLEKMFEAMGGKELDAEASGTLKELQVKLNNVLDELSHVFATSFNLTLFAKICEKTVLKRVLKELWKLVMNTMERTIVLPPEF |
5 | 2pffB | 0.18 | 0.17 | 0.96 | 0.37 | HHpred | | ---ELVGKFLGYVSSLVEPSKVGQQVLNLCLTEF--ENCYEGNDILAAKLLQENDVKTKELIKNYITARI-MAKRPFDKKSNSALRAGNAQGNTDDYFEELRDLYQTYHVLVGDSAETLSELDAEKVFSNTPDKDYLLSIPVIQLAHYVVTAKLLGFTPGELRSYLKGATGLVTAVAIAET-D-SWESFFVSVRKA |
6 | 6fgzA | 0.15 | 0.08 | 0.56 | 0.42 | MRFsearch | | --------------------------------------------------------TLARTLSTL-LMKHIRDTLPSIRQKMSQQLAEWRK-ELQTLGDLGGALLNVINRYSSEFAKSLEG--------------LYGGARINYIFNDIYAKELQSMTREDIRTAIR-NVPELAFELLVKKQ-------------- |
7 | 5mdtA | 0.12 | 0.08 | 0.66 | 0.59 | FFAS-3D | | ------------------------------------SGIAEFDGIL-DSLEHSKTGISGSKILKLTNLSMEVSENAQFVASVYKYAKRAPV-------THKLGALYILDSIVRSFQDGAKKNNESFENPVDASFSGGW-CKAAEITDSLVADAIQHAPSAHLP---KILKLCDIWEK------------------- |
8 | 6w2rA | 0.09 | 0.08 | 0.96 | 0.72 | SPARKS-K | | DERRELEKVARKAIEAAREGNTREQLQRALEIARESGTKTAVKRVAQEAAKRGNKDAIDEAAEVVVRIAEESDALEQALRVLEEIAKAVLKSEKTEDAKKAVKLVQEAYKAAQRAIEAAKRTGTP--------DVIKLAIKLAKLAARAALEVIKRPKSEEVNEALKIVKAIQEAVESLREAEESGDPEKREKARE |
9 | 2h4mA | 0.16 | 0.12 | 0.79 | 0.69 | CNFpred | | ------LPELIPHLIQCLSDKKALVRSITCWTLS------RYAHWVVSQPPDYLKPLMTELLKRIL--DSNKRVQEAACSAFATLEEEACTELVPYLAYILDTLVFAFLLILYDAIGTLADSV----------GHHLNKPEYIQMLMPPLIQKWNMLKDEDK----DLFPLLECLSSVATAL-------------- |
10 | 5bv9A | 0.09 | 0.08 | 0.88 | 0.83 | DEthreader | | FLYQIH-EAYSYADADARGLRGMYLTKRQLEFYVWLQSKEGAIA-GG-A-TNSWNGDAPVY-HDPPSNNWFG-MQAWPMERVAELYYIFVKDGDKTVQMAKSCITKWVNYALDYIPS-EGYF-----R----LPGDPTDTGVLGSLVKAFTFFAAATKGNYTA--LG---VR-AKDAAAQLLE-AWNMAAYAHRLL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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