>PF15771 (574 residues) GNTKSSNWNSNQTDHSSLSDSQFLFGSQFCPESSETLSAPLDFGAHLRRPKQSQQNSLES EPSVFTKYQTKPQLFGGDKKDGGLFPLPLSVGKSKGLLEQFEEKKKRAKDRCDSEALYNF ISHTRESIYRLQTSVEKSEEHLSSRSQSILDSLETVAKTLQETAQAQSDLVLETAQDKGN MEQAILEMQKRFEARQAEFSEMKSNLKHLEVLVAQQNKDFQQLCEQLGQLNVPSILAELK RLISVPQVPRHVKDSTSQTSPPLAQSLNFTRQDKYASEEPILWQAQALPAARILNRGSLQ PGEFGVWGERAKNDTLQKEAALLAVGTGKRNRPVKDKAVQTNCKNLAITKTGSENHSLDI QGHKVPGDRDLVSPGASQLISLDLNNFATSIKNTCQELQAKGLFSCDPCEQQLVTEQKGR AVERVAKGKKQQPRKVQRGRLLARKQEQTPSKTCAFSSKYPQPPVSGPQRLPVEQQEPLD QPLHLRRPRSPTKPVCPALGGTVMPSKTVRAAQGNLLQFSRHSSQDNSLLSNSSQGDHRM SWFSDLNLGSSEPPLCKEPGKNTLYDLGFDSSDD |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520 540 560 | | | | | | | | | | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | GNTKSSNWNSNQTDHSSLSDSQFLFGSQFCPESSETLSAPLDFGAHLRRPKQSQQNSLESEPSVFTKYQTKPQLFGGDKKDGGLFPLPLSVGKSKGLLEQFEEKKKRAKDRCDSEALYNFISHTRESIYRLQTSVEKSEEHLSSRSQSILDSLETVAKTLQETAQAQSDLVLETAQDKGNMEQAILEMQKRFEARQAEFSEMKSNLKHLEVLVAQQNKDFQQLCEQLGQLNVPSILAELKRLISVPQVPRHVKDSTSQTSPPLAQSLNFTRQDKYASEEPILWQAQALPAARILNRGSLQPGEFGVWGERAKNDTLQKEAALLAVGTGKRNRPVKDKAVQTNCKNLAITKTGSENHSLDIQGHKVPGDRDLVSPGASQLISLDLNNFATSIKNTCQELQAKGLFSCDPCEQQLVTEQKGRAVERVAKGKKQQPRKVQRGRLLARKQEQTPSKTCAFSSKYPQPPVSGPQRLPVEQQEPLDQPLHLRRPRSPTKPVCPALGGTVMPSKTVRAAQGNLLQFSRHSSQDNSLLSNSSQGDHRMSWFSDLNLGSSEPPLCKEPGKNTLYDLGFDSSDD | |||||||||||||||||||
1 | 2pffB | 0.07 | 0.06 | 0.88 | 1.00 | DisCoVER | NSALFRAVGEGNAQLVAIF-GGQGNTDDYFLVLISLLSIPISCPLIGVIQLAHYVTAKFTPGLRSYLKGATGHSQGLVTAVAIAETFVAILFIGVRC---Y---------------E--A--YP--NTSLPPSILEDSLENE--GV--P--SP-ML--SI-SNL-TQEQVQDYVNKTNLPAGKQV-EISLVNGAKN-LV--V--SG-PPQSLYGLNFSNR--FL--PVASPFHSLLVPASDLIDIQIPVYATHILDFGPGGASGLGVLTHRN--------KDGTGVRVIVAGTLDDDDYGFKQGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-GGGGGGGGG-GG--GGGGGGGGGGGGGGGGGGGGGGGGGGGG------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG---GGGGGGGGGGGGG- | |||||||||||||
2 | 5a22A | 0.06 | 0.04 | 0.65 | 0.67 | DEthreader | PISTSQMHKWMGMDRNFLMVDVIIGRMLIYGDKIVQGNSYDLKMVSVIRFLHQIMSVKTLTLVIYGSFRH-----SDK-----KEREL------KL--AGRF--FS-LMSWKLREYFVITE------V---GL--------DSSSGICIANHI---W---NPVFRVMGSLIERTHEFF---------R--GW-IL--L---KVLAQGDNQVIC--V-EM--KLLINDDE--------NYGKIPIFRGVI-RG-LE-TKRWSRV-TCV----QIPTCA---NIMSSVSTN-A----LTVAHFAENPIN----AM-IQYNYFGTFARLLMHSTFKAMLPGVSGMSRDPVIHIDKLVEDP--LNIAMG-MSPANLLKTEV---------------LSEFKSGLGDGLISLFQNSRT------------------------------DRVIGTT---KTSEKV----RLDAWFRTGSALHR------MSHGGFADFLFQATL--LYAQITTTVARDGWI---------------------------SGSVMASPW--------HEENSWR-D------ | |||||||||||||
3 | 3dtpB | 0.10 | 0.10 | 0.99 | 0.52 | CEthreader | FGNAKTVKNDNSSRFGKFI--RINFDVTGYIVGANIETYLLEKSRAIRQAKDERTFHIFYYLIAGASEQMRNDLLLEGFNNYTFLSNGHVPIPAQQDDEMFQETLEAMTIMGFTEEEQTSILRVVSSVLQLGNIVFKKERNTDQASMPDNTAAQKVCHLMGINVTDFTRSILTRIKVGRDVVQKAQTKEQADFAIEALAKAKFERLFRWILTRVNKALD-ASFLGILDIAGFEIFEINSFEQLCINYTNEKLQQLFNHTMFILEQEEY---QREGIEWNFIDFGLDLQPCIELIERPTNPPGVLALLDEECWFPKATDTSFVEKLIQEQGNHAKFQKSKQLKDKTEFCILHYAGKVTYNASAW-LTKNMDPLNDNVTSLLNQSSDKFVADLWKDVDRIVGLFRTVGQLYKEQLTKLMTTLRNTNRCIIPNHEKRAGKLDAHLVLEQLRCNGVLEGIRICRQGFPNRIVFQEFRQRYEILAANAIPKGFMDGKQACILMIKALELDPNLYRIGQSKIFERDLKITDVIIAFQAQCRGYLARKAFAKRQQQLTAMKVIQRNCAAYLKLRNWQWWRL | |||||||||||||
4 | 6gmhQ | 0.05 | 0.05 | 0.98 | 1.23 | EigenThreader | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG--------GGVEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFAS---SSFVLPFFGLGQMYIYRGDKENASQCFEKVLKAYPNNYETMKILGSLYAASEKRDIAKGHLKKVTEQYPDDVEAWIELAQILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNYFLASLDRAKAEAEHDEHYYNAISVTTSYNLARLYEAMCENDAKNLYAANGIGAVLAHKGYFREARDVFAQVREATADISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVVLYLARALFKCGKLQECKQTLLKARHVAPSDTVLMF | |||||||||||||
5 | 1ei3C | 0.15 | 0.08 | 0.56 | 0.38 | HHpred | ---------------------------------------------------------------------------------------------------------------CGADFFNKYRLTTDGELLEIEGLLQQAT---------------NSTGSIEYLIQHIKTIYPSEKQ---TLPQSIEQLTQKSKKIIEEIIRY-------ENTILAHENTIQQLTDMHIMN--SNKITQLKQKIAQ--LESHCQEPC-KDT----------------AE---------IQ--------ETTGRDCQIANKGARSGLYF-------IKPQK-----AKQSFLVYCEIWTVLQ----RRLD---G-SEDFRRNW-------------VQYKEGFGHLSPDD--TTEFWLGNEKIHLITTQSTLPYELEWSGKK----------------------GT---ADYAVFKVGT---------EEDKYRLTYAYFIGG--ERGDAFDGFNFGDPSDKSTYHNGMRFSTF-DNDNDNFGNCAEQDGSGWWMNRCHAGHLNGPYYIGGVYSNSYDNGI----- | |||||||||||||
6 | 6gaoA1 | 0.15 | 0.04 | 0.28 | 0.42 | MRFsearch | -------------------------------------------------------------------------------------------EEIKKQVQVNVDDIRAANIK--LDGLGRQIADISNSISTIESRLGEMDNRLVG-ISSQVTQLSNSVSQNTQSISSLGDRINAVEPRVDSLDTVTSNLTGRTSTLEADVGSLRTELAALTTRVTTEVTRLDGLINS-----GQNSIGELST---------------------------------------------------------------------------------------------------------------------------------------------RLSNVETSMV-----------------------TTAGRGLQKNG---------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
7 | 5dfzB | 0.17 | 0.16 | 0.96 | 0.70 | FFAS-3D | GDIKTENILVTSWNWCILTD----FAAFTC------YLAPERFNSKLYQDGKSNNGRLTKEMDIFSLGEGRPQLF---KYKSNSYDVNRSTDLRNLVLDMIQELLNKYRGIFFPDYFYTFISTLEDNVKLLDETTEKIYRDFSEKIKSVISYLSHSIRSIVSTATKLKNLELLAVSDENKIDRVVPYFVCCFEDSDQDVQAL-SLLTLIQVLTSNENIFVDYLLPRLKRLLIANCLSDLAIIINRFQFAQHCNDNSSDNDTYVKMALLQNRERTNDKDPALRVSLIQTISGISILLGTVTLEQYILIQTITDSEELVVISVLQSLKSLFKTGLIRKKYYIDISKTTSPLLLHPNNWIRQFTLMKQPVSRSVVRASKSLFWKKIITNHVDSFGNNRIEFITKSTVYSHDNKEIPLTAEDRNWIDKFGLTEKDIWKIVALRGYVIRTARVMAANPNLKNVFVQLEPTSYHMHSPNANVKPERKVVVSNSYEGDVESIEKFLSTKILPPLRDYKEFGPIQEIVRSPNMGN------LRGKLIATLME--NEPNSITSSAVSPGETPYLITGSDQG-- | |||||||||||||
8 | 5yfpE | 0.08 | 0.07 | 0.93 | 0.88 | SPARKS-K | ---------SLYELDPKWKKLL----------KTDNFLGGLT-------VNEFVQELSKDHRNDVLIDANTKNLPTNEKDQDAIREAIWKQLDPKPYIRTFESTLKELKNLNELNKRQYFSEQVATQEVIHSENVIKLSKDLHTTLLTFDKLDDRLTNVTQVVSPLGDKLKKQNYIQSVELIRRYNDLMKNLLIIPKTINTKLVIEKYSEMMENELLENFNS---AYRENNFTKLNEIAVNVIQS--FINQHDYFIFIKNVKFKEQLIDFENHSVIIETLINDVETVIKNESKIVKRVFEEKATHVIQLFIQRQKIEPRFEVLLRNSLSIS---NLAYVRILHGLFTLFGKFTKSYFQLLEIDDSNQIEQCFLYDRSKYFGIEKRSLEAILVDMTSKFTVNYDKEINKRVDKYKEKLSTNSTARVMELIPNKA-HLYILEILKIMFLGIVDSYMEIALEVAYWKICK-VDINKTAGVVNLNFLKFFLPLLNNSPEIKIIEMTNSQIQKMEILINIILQETITVISTSAILCKQKKKDFVP---KSQELLDQDTLPAIEIVNNLIFEQSSKFLKG | |||||||||||||
9 | 5y05A | 0.12 | 0.03 | 0.26 | 0.65 | CNFpred | ---------------------------------------------------------------------------------------------EQKRLDELTAQRGEVNDR--LAALGIALEDLDAQVAKYESEIDSVRQREDRDRA-QVTEIQHELETLQRRQASLEEQLLEVMERREELMAERSEELRRVDELQTELTEAQQARDAALVELDQARHQCATRRDALVNAIDDQLVELYEKQRA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ | |||||||||||||
10 | 6qk7A | 0.05 | 0.03 | 0.59 | 0.67 | DEthreader | ------------STAEGDEDDLSFT--------------------DIGA-----------------VLASFNIQ--D--DKLLSFVHFADINQLVFVFDIITIMGTIDNG-I--AA--AQWSYDEE----------------------------------SWRGDCDYFAVFSREGQLDSASEPHLSWKSLIAEWNNSEAKDFFAYKMRDFTSLEITDSFLLVHLNST------M---YAPETK-TSKKICDVLNVLLSNPEYKK--K----------YLQTIITLAALKLISELEEKDSCVTYLC-FL-Q-D--VNVVYKSAL-SLYDVSLALLVAQKSQMDPREYLPFLQELQD--N---------------R-FLIDDYYEALYVEDLYKHGLAYMYTDA-------------------------------------------------KRWREAMSIAVQ-----KFPEEVESVAEELISLT-----RYVDAADIQ-A-LYCKAYRYDIASVDGLGEGFGIIELDVVGLRNMREQA---------------------------------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |