>PF15768 (270 residues) GPLYKHFDWERKSAKQAEARLSQRLQRLEDICLYHMKLLTREQRQLQKELQRLQQADIIK KKFSSYFGNGIQQRPEDVLVFSPHGEQKHRVPQANKVRALAASVTPKIYKTKSQMPPFHR TGLKDPRRSKEQLPSQNDKTPDFIEEKSQAQENDSINPPKGKDANTGISLLCQDQEVSTQ TPDQGLSSSPAGDSGMAHVDETRSKDADGNLDHDTGKQIPPNPMECAGNFKVKSTTSTYL ELFAKVRNAHYLRHRVPPESERLLSLGEIF |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 | | | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | GPLYKHFDWERKSAKQAEARLSQRLQRLEDICLYHMKLLTREQRQLQKELQRLQQADIIKKKFSSYFGNGIQQRPEDVLVFSPHGEQKHRVPQANKVRALAASVTPKIYKTKSQMPPFHRTGLKDPRRSKEQLPSQNDKTPDFIEEKSQAQENDSINPPKGKDANTGISLLCQDQEVSTQTPDQGLSSSPAGDSGMAHVDETRSKDADGNLDHDTGKQIPPNPMECAGNFKVKSTTSTYLELFAKVRNAHYLRHRVPPESERLLSLGEIF | |||||||||||||||||||
1 | 6oisC | 0.07 | 0.06 | 0.89 | 0.81 | DisCoVER | ---------------MGN-KIKQHEDNLKFLKSQKNKMDEAIVDLQVHMLNDINAQ---ILRHENSAAGVLSLVE-GVVGVVA----KLGKV-N-DENLSQILSNYLGTRSMLAVVCRNYESVTALEA---YDNHGNIDINAGLHCFDAICLERRLDKPKLPCPPGFLGFAVNMIQIDPYLLCVTSYGYGLRETLFFRLQVYKMACISDGAVSLDGGIIRKTGIFNLGNRDEVNVRFAKPEAEKKMKELKWKTLDI-KREQVLRAVFNF- | |||||||||||||
2 | 3giqA | 0.05 | 0.03 | 0.71 | 0.67 | DEthreader | ----------RDGRIAAILA-HAWDASGKIVA-PG--FI-DVH-G--HDDLMFVEKPLGETPLFAD-V-PAYFALVGHAN---------------Q------------AVGFSTGGVAQAAELEGIRN----ADGVEAAVEEVLAIGRTCATVVSHHKCSRL--IYPYPGSSTILIRIITSGEYI--GLPNDA--PHPRLGSFTRGRYVR--TLE--QAVARMTALP---------------A--FGF-AERGVLQPGAWADVVLVVFPP | |||||||||||||
3 | 1vt4I3 | 0.05 | 0.05 | 1.00 | 0.77 | CEthreader | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG | |||||||||||||
4 | 6ok3A | 0.06 | 0.06 | 1.00 | 0.70 | EigenThreader | AALVLGNLHRKGPKAIAYWKRAAVYHNLGTAYYDGHEAVRWWESQNNLGALYNDGNQEAVFWYRSALQGDELGQYNLGVAYYYGRGIKKDFSEAVSWYKKSAEQDYHNLGVTYYEGEGIKKDYAKAVYWWAAEQGIPQSQYNLGIAYEEGWGAEKNWYRAAEQGHADAQNRLGIAYRYGTGVRKNLEKAAKQGLARAQFNLGKTFYIGYWFIKAANQGFTEAQAYIGVKPNIKEGVALTKKAALQAAYALYLSASPHFDFAEKARLDLER | |||||||||||||
5 | 5gmkt | 0.06 | 0.01 | 0.20 | 0.29 | HHpred | ----SRYIPNVSLLGIVDSYLKHQEIVLSNQWRINNDYIRQTCTIVEEMNIQQRKQ-IN------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
6 | 6l5jA | 0.26 | 0.07 | 0.27 | 0.33 | MRFsearch | --AVKKAESERISLKLANEDKEQKLALLEEARRTGLQEVERSRLEARRELQELRRQKL------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DSENTRLGRELAELQGRL-------------- | |||||||||||||
7 | 3jc8Na | 0.12 | 0.07 | 0.64 | 0.51 | FFAS-3D | --WYDDRQSELEAHQAGVASTKARIAELEKI-IGEVKNINTRKAEVEKKLAVLDALRKGRSGPVRMMDALASATPKKVWVKTFSENNNASAVSHDEVAEFMRGLNGVVWTPKGMGRLVDRRRDSKTARVEMLTSDPEAQVSPFFKNIDLQTAKQVGGAQVGVPILVEFKITMTSN----------------------------------------------------------------------------------------------- | |||||||||||||
8 | 5ytiA | 0.10 | 0.10 | 0.97 | 1.13 | SPARKS-K | ELFQNNRQAADSALRLEEGILSNAVNSLHRLREIQIQTLAVEAQALLNQLLDYANTKDSNGSYFS--GSKSLTQPGQYVYNGDSTQRFQAVTTSLLVAVNGDNVFRIPSGNGRFAIRETLTPNTGTASVSSGSVTNEAAFVPDNYTTFALNSQGNLVVVSGTLSGNVIP----PSGLPDDAPLYQEGSAIGFNGEVVSGL---PKAGDSFSISPAKNESIFSTVQRINNLNKPYTSSVLLAQIDSALGHILSVQSDLGARLNQLETAEKA | |||||||||||||
9 | 4p9tA | 0.14 | 0.03 | 0.23 | 0.49 | CNFpred | -------SVKRGTMVRAARALLSAVTRLLLADMADVMRLLSHLKIVEEALEAVKNAT-NEQDLANRFKEFG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
10 | 6lcpA | 0.04 | 0.03 | 0.66 | 0.67 | DEthreader | TAYGSIGPLTGFITFWAAVIVFQNLVPISLYISLEIVRTLQAFFIYSD-VGM-YYEKIDQ-------------------------------------GD-PKMIFKAPDEALKGADSVYSRLKKG---------------EQADMRRE-TAQHLEMF----A---VEGLRTLIEDDKT--IGDDVMIQEADVG------F------R-------LQRLVLVGR--YR--R---ETISNFFYKNMIWTWSIFWYQYCDIAYIFEYTILMFN | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |