Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | KLWHGLVIAVASLILQACLLVVVNYLLSRHIAKENEQLLQRARLQAPKLNPAHHHLPAAQEMKETRAERSTPVSEPCYRHDSDTSSDSSDTSDSSNSSPPTGQATKNVNYTQVVFSATGRLKNKFALDYENIKETTDYVNIDPKSHTHNSWTFVNPAVSEPVEYTQVAI |
1 | 6y5rA1 | 0.05 | 0.04 | 0.82 | 0.93 | DisCoVER | | ------GTFMGVYLPCLQNILTWVVGTAGVLQAFMLTAISMSAIATN---GVVPAGGSYFMISRALGPEFGGAVGPPHFPVCMLGNRTLSSCNNVTSIQG-IPGLASGIITENL--------------------WSNYLIEKPSAYVLVGIMAGGTAIGACIEGVVLR- |
2 | 3re2A | 0.07 | 0.05 | 0.69 | 0.83 | DEthreader | | KSVVEVFRQELRNDQP---------------------TREIVKNVADWGCLANLVAVVAMCQALGYNDVHLWVVT----------------------WLYLN---GNAVHCMEVIIINPQLSQLQQELLWLLYD-MGHIYPMAIANGLATVAREYSDHHIYPY------ |
3 | 5wb1A | 0.07 | 0.07 | 1.00 | 0.48 | CEthreader | | RVLIAVVLVFIIFWLPYHLTLFVDTLKLLKWISSSCEFERSLKRALILTESLAFCHCQELHCLLAEFRLVPRGPRGSQVQLVESGGGLVRPGGSLRLSCAASGSIFTIYAMGWYRQAPGKQRELVARINYADSVKGRFTISRDNAKNAVYLQMNSLKPEDTAVYYCNAE |
4 | 6k7gA | 0.08 | 0.08 | 0.92 | 0.60 | EigenThreader | | SKYKEITLKHLEQFATEGDFQEWRAVYQRARLLKLEESYELIEKNLQLLGKLQDQVPETIETLMKADIKLLKKNMGMDGKTLKYALTFGVRVSPLQKSEVVEMVKKQVKVVTLAIGDG-------ANDVSMIQTAHVGVGISGNEGLQAANSS------DYSIAQFKYL |
5 | 2ks9A | 0.07 | 0.04 | 0.48 | 0.26 | HHpred | | --QQVYLAIMWLAMSSTMYNPIIYCCLNDRFRLGFKHAFRCCPFISAGDYEGL-------E---MKSTRY------LQTQGSVYKVSRLETTISTVVGA---------------------------------------------------------------------- |
6 | 2z73A | 0.09 | 0.03 | 0.31 | 0.30 | MRFsearch | | --SNILCMFILGFFGPILIIFFCYFNIVMSVSNHEKEMAAMAKR-----------LNAKELRKAQA------------------------------------------------------------------------------------------------------- |
7 | 7d3uC | 0.19 | 0.11 | 0.57 | 0.48 | FFAS-3D | | -----LAISVGVLMAGFVFLVMVRVILGFILLSHAAHLTLMAAGGVSDPDPALTSDGLPQAFVLTGDDDDTDIGDLDPLDLLPETPGGAHPEDPEPDEPST-------------------------------------------------------------------- |
8 | 6em5r | 0.06 | 0.05 | 0.95 | 0.95 | SPARKS-K | | -----PQNDYIERHIKQHGKRLDHEERKRKREARESHKISERAQKLTGWKGKQFAKKRYAEKVSMRKKIKAHEQS-KVKRMITKHTFVGEGFTRRPVKMERIIRPSALRQKKANVTHPELKKNPQSPMYTGVLTKGTIIEVNVSELVWGKYAQNEPDRDGCV--NAVLL |
9 | 4dx6A | 0.13 | 0.04 | 0.27 | 0.51 | CNFpred | | TLTMFGMVLAIGLLVDDAIVVVENVERVMAEEGPPKEATRKSMGQ---------------------------------------------------------------------------------------------------------------------------- |
10 | 4uicA | 0.11 | 0.08 | 0.76 | 0.83 | DEthreader | | ----GGAKKDAYLADLQAIYEYVFEARTYIDAYNYATKLDKMRQELAVLFKAELQKAAQDAKAAYEAA----KPVDKTAIPKNF-SITLKGTE-----------------LVDGKTYTV-VTSGLSTNE--FT--YNKPVPAS--VKDAAGN-------VIKSGFEVKG |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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