>PF15719 (187 residues) WAYSSTHDAKSTFEGTCPYCFQLLVLDNYRVRLKPKPKLTPRIQKLLNREARNYTLSFKE AKIVEKYKDSKSVLLITCKTCNRTVKHHGKSRSFLSALKSNPTTPTSKLSLKTPERKTLS SADLNHDVSGSKGKSPALIFRTPTSGQSTPTCSSKNTSKTKKRFSQLKMLLSQSESQKSP KVDFRNF |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | WAYSSTHDAKSTFEGTCPYCFQLLVLDNYRVRLKPKPKLTPRIQKLLNREARNYTLSFKEAKIVEKYKDSKSVLLITCKTCNRTVKHHGKSRSFLSALKSNPTTPTSKLSLKTPERKTLSSADLNHDVSGSKGKSPALIFRTPTSGQSTPTCSSKNTSKTKKRFSQLKMLLSQSESQKSPKVDFRNF | |||||||||||||||||||
1 | 1stmA | 0.01 | 0.01 | 0.59 | 0.64 | DisCoVER | TSLVYDTCSFQRQSFLDRAFQVVAFTIQGVSAAPLMYNAR--L--YNP-GDTDSVHATGVQLM--GTPRTVRLTPNNWFFG-N-----------T-EEAETILA--------------IDGL-------------VSANAPSNTVIV---------------T--GC--FR--L-------APSEL- | |||||||||||||
2 | 3p5pA | 0.07 | 0.05 | 0.74 | 0.67 | DEthreader | KIKMFN--ALGD-------------GDIS-------------------GIESHFSLCDLSPDF-NLSPCMYSILLLSVIEGFIALYVRHWITTALGLRT----LRMHG---YNVSSDVNNFFSSAGQTH-----V--ELRSVNLAYLELILFIEYEYPMSILEASYIDSYDDNYLSNSKCELAKDFF | |||||||||||||
3 | 1vt4I3 | 0.03 | 0.03 | 1.00 | 0.59 | CEthreader | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG | |||||||||||||
4 | 1fwxA | 0.08 | 0.07 | 0.92 | 0.70 | EigenThreader | EKAIAAGDYGVKVVDGRNPHGCNMADKKHLCVAGKLS--PTTRFDAVFYE---NAD-------PRSAVVGLGPLHTAFDGRGNAYTSLFLDSDAIRAYAGEKVDPHYQVMGETLDATNDFSKDRFLNVGPLKPDKMGPTFAEPHDPSILSDIKSVWDRNDPMWAETRAQAEAD---GVDIDNWTEEV | |||||||||||||
5 | 1x0tA | 0.24 | 0.07 | 0.29 | 0.73 | HHpred | ---AKVKIPRKWKRRYCKRCHTFLIPGNARVRLRTKR---------------------------------MPHVVITCLECGYIMRYPYL------------------------------------------------------------------------------------------------- | |||||||||||||
6 | 6k0aG | 0.30 | 0.10 | 0.34 | 0.78 | MRFsearch | ---------KKWKRRICKKCGTFLLYGNARVRIKSKR---------------------------------YPHVVITCLECGAIYRIPM------------------------------------------------------------------IREKKEKRRKKLEERLK--------------- | |||||||||||||
7 | 3u5cM | 0.12 | 0.08 | 0.66 | 0.47 | FFAS-3D | -----------------------------------EVTIEDALKVVLRTALVHDGLARGLRESTKALTRGEALLVVLVSSVTEANI-----IKLVEGLANDPEN-------KVPLIKVADAKQLGEWAGLGKIDREGNARKVVGASV----VVVKNWGAETDELSMIMEHFSQQ------------- | |||||||||||||
8 | 5mqfM | 0.08 | 0.07 | 0.95 | 0.81 | SPARKS-K | DKVQSLNVDAIIRGGLTRFTDQLGKLWCSLADYYIRSGHFEKARDVYEEAIRTVMTVRDFTQVFDSYAQFE-------ESMIAAK---METASELGREEEDDVEQLISRRPLLLNSVLLRQNPHHVHEWHKRVALHQGRPREIINTYTEAVQTVDPFKATGKPHTLWVAFAKFYEDNGQLDDARVIL | |||||||||||||
9 | 1x0tA | 0.31 | 0.07 | 0.22 | 0.90 | CNFpred | -------------RRYCKRCHTFLIPVNARVRLRTKR---------------------------------MPHVVITCLECGYIMRYP--------------------------------------------------------------------------------------------------- | |||||||||||||
10 | 5amqA | 0.04 | 0.03 | 0.73 | 0.83 | DEthreader | ATLMMDNALFIFRIAMCANVFAIVFPSVVYSIIVLHK------------------------------EEEN-IFN-------PGCLHGTFCYISIS-R-----AIR-LD--LHEKHHVMVDAKTLECEQIKEIWQT---VEAKCKLPGVQKSEQEIRFLVETTRNRIDEAIEALATEGNKIELSLGK | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |