>PF15716 (199 residues) MLPVQRRKLDPLLKKYRHYKKATRTKRRKKEKMEAQCSPVLPTPSTPLQSEEDEAVDKKP TLLSAQEDTPDLLQEDRLQCLQEEGSSVMHQECQIQSCELLVAQKPRPSSPAVTSLASPP LCFGSFLSCVCQTFSRSRKQKPPRRNGNNQAEAGGDAEVLRPGLAKPELSLSKTCSHLQL IQLSFVFSFIVLSVCHCSS |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | MLPVQRRKLDPLLKKYRHYKKATRTKRRKKEKMEAQCSPVLPTPSTPLQSEEDEAVDKKPTLLSAQEDTPDLLQEDRLQCLQEEGSSVMHQECQIQSCELLVAQKPRPSSPAVTSLASPPLCFGSFLSCVCQTFSRSRKQKPPRRNGNNQAEAGGDAEVLRPGLAKPELSLSKTCSHLQLIQLSFVFSFIVLSVCHCSS | |||||||||||||||||||
1 | 2nbiA | 0.05 | 0.04 | 0.74 | 0.68 | DisCoVER | -------------------------P--APSSQPSAEVIEQCPIDLPYGDS---SR---PLDCTDPAVNRPDCDVLPTINCP--ACCAFECRMFTPSPGDCTCNVLPFPNCCCPFLCPY--DTCFLP--FD--DS--SRPPDCTDPSVNRPDCDKLSCCCPTQCRPDNP-MFSPSPDGSP--PV--CSPTMMPS--PL- | |||||||||||||
2 | 4kihA | 0.05 | 0.04 | 0.74 | 0.83 | DEthreader | HPTEAYYMWLEAMAFTQSYVAKTKMGDFLRYSFFFIGSNYQNAAILSNNSLKR-QI-EFYQWLQSAEGGIAGRTFMGYTP-HPVYE---------------------SNEWGM--W-----S--MQRVAEYALLDKWAKWACANVQFFKIPAKLVYDVASLS-NALSYYAKALES-----------------RFWGQD- | |||||||||||||
3 | 6bk8B2 | 0.08 | 0.08 | 1.00 | 0.41 | CEthreader | WDSLASRNVWSFYNGNVLINDTLPDEISPELLSKYKEQIIQGFYWAVKEGPEEPIYGVQYKLLSIIDVMKQIIPLMKKACYVGLLTAIPILLEPIYEVDITVKTIKVAGTPLLEVRGQVPVCQLYFWHKIWRKVPGDVLDKDAFIPKLKPAPINSLSRDFVMKTRRRKGISTGGFMSNDGPTLEKYISAELYAQLRENG | |||||||||||||
4 | 1jb0A1 | 0.08 | 0.07 | 0.84 | 0.53 | EigenThreader | PVPTSFEKWAKP-----------------------GHFDRTLARGPQTTTWIWNLHALAHD-----FDTHTSD---LEDISRKIFSAHFGHLAVVFIWLSGMYFHGAKFSEFQLYCTAIGGLVMAGLMLFAGWFHYHKREWFQNVESMLNHHLAGLLGLGSLAWAGHQIHVSLPINKLLDSDTAHHHLAIAVLFIIAGH | |||||||||||||
5 | 3qv2A | 0.14 | 0.08 | 0.56 | 0.33 | HHpred | ------------------------------------------------------------ATFIPFDINEIA-----NKIYSKNKEEV--QVKNLD--SISIKQIES--LNCNTWFMSPP----------CQPYNNSSKHKDI--NDPRVLHLYDILPYLKPKHIPLFKESL---VFKEIYNILIKNQYYIKDICSPI- | |||||||||||||
6 | 4l3iA2 | 0.13 | 0.06 | 0.47 | 0.42 | MRFsearch | --PFQEEGETTILQLEKDLRTQVELRKQKKERKQE------------------------------------------------------------------------------------LKLLQEQDQELCEILC--------------------PHYDIDSASVPSLEELNQFRQHVTTLRRREEFVSIKRQIILCEE | |||||||||||||
7 | 2akhY | 0.10 | 0.10 | 0.91 | 0.41 | FFAS-3D | IEQARQGDLHFLVLLLVAVLVFAVTFFVVFVERGQRRIVVNYAKRQQGRRVYAAQSTHLPLKVNMAGVIPAIFASSIILFPA-------------TIASWFGGGTGWNWLTTISLYLQPGQPLYVLLYIIFFCFFYTALVFNPRETADNLKKSGAFVPGIRPGEQTAKY-IDKVMTRLTLVGALYITFICLIPEF---- | |||||||||||||
8 | 6f1tg1 | 0.05 | 0.05 | 0.87 | 0.97 | SPARKS-K | ----------LTEEEKQQILHSEEFLSFFDHSTRIVERALSEKLSLNRQFFDERWSKHRGIHCHAAVGA--VDFSHLFVTSSFDWTVKLWST----KNNKPLYSFEDNAGY-VYDVMWSPTHPALFACVDGMGWNLNNDTEVPTASISVEGNPALNRVRWTHGQIVGEQIAVPRNDEWARFGRTLAEINAN-------- | |||||||||||||
9 | 16vpA | 0.10 | 0.04 | 0.36 | 0.79 | CNFpred | ------------------------------------------------------------------------------------------------------------------------TVLANFCSALYRYLRASVRQLHRQAHMRGRDRD-------LGEMLRATIADRYYRETARLARVLFLHLYLFLTREILWA | |||||||||||||
10 | 4f4cA | 0.09 | 0.07 | 0.73 | 0.83 | DEthreader | ----KLLLFIGTLVAVIGMFQYLQF--T-QALCGFAIKS----------R--LRYAAGKVVTISSIR-TV-V-L---NG-LRYELERYSTEAKKAGKGLGFGMQANFILAAAQGICSFLMTFFMGIASESLTRDLRNKLFRNLQFFDSNAKISTRLATDPNTDRSYFPEYAK--------------------------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |