Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | SRDSGGYYHPARLGAALWGRTRRLFWASPPGRWLQARIELGSPDEDPERQEDEQDVEDDYYDMEGGREEVESREEGQPCGEEPSPQQGPGPAEEAHDGDASDADDAEGALALSCQGPAGSGGSAEALLSDLHAFAGSAAWDDSARPAGGQELHVTAL |
1 | 6nn3A1 | 0.09 | 0.05 | 0.55 | 0.65 | DisCoVER | | HFYQPQNFMP--GP--LV--NS--VSTGLPGSQPY-HHW--------------------------------DTDKYVTGINAISHVGRFPNEKEQL---KQLQ----GLNMHTYFPNKYTDQIE--RP--L----MVGSV-------------WNR- |
2 | 2f6dA | 0.08 | 0.07 | 0.89 | 0.83 | DEthreader | | YFEAYSVSLYYLLQNI-VIAS-Y--WTRD-AITLTVLSELEDNFNTTLKAVEYYINTSYNLQRTSNAYTGAWGRPQNDGPARAYSRYN------VQ--LESYGDGGFVVENPGLDSAYIGLLLATAYAFLQILI---GSL-NEQLNSTGAYSLSSLL |
3 | 5flgA | 0.14 | 0.14 | 0.99 | 0.56 | CEthreader | | GERLIPFHEMKHTVNALLEKGLSHSRGKPDFMQIQFEEVHESIKTIQPPEEGQKLARLLLEKEGVSRDVIEKAYEQIPEWSDVRGDQTKEKGVRVSRMDWPDANFEKWALHSHVPAHSRIK-EALALASKVSRHPAVVAELCWSDDPDYITGYVAGK |
4 | 6wucK | 0.07 | 0.06 | 0.97 | 0.57 | EigenThreader | | DVLDVYIKNLENQIGNKRYFLKQAQGAIDEITKRLSLRAQSSSEWLSLMNDQSVDQKAMLLLQNNINSDLKARNKELWDSLADFLKGYLVPNLDDNDESIDSLTNEVMLLMTLNDFSSKTIPIYRLLLRAN-----IITVIEGSTNPGTKYIKLIDF |
5 | 1k1yA | 0.15 | 0.11 | 0.75 | 0.37 | HHpred | | -IVVAGFYEPVRLVQIEMLYARK-LGYDAKGVWLTERVWQPE------LVKSLREAGIEYVVVD----------DYHFMSAGLSKEEWPYYTED--------GGEVITVFKLRYLIP---FRPVKKTIEYLESLTSD----------DPSKVAVFHD |
6 | 2wdrA | 0.14 | 0.08 | 0.59 | 0.40 | MRFsearch | | ---------NSLLDLVVFGRAAGL------HLQESIAEQGALRDASESDVEASLDRLNRWNNNRNGEDPVAIRKA-------------------------------LQECMQHNFSVFREGDAMAKGLEQLKVIRERLK------------------ |
7 | 6c0fI | 0.12 | 0.08 | 0.66 | 0.31 | FFAS-3D | | ----------------------------------LKRQEIFADIKHEKNKERHTMRRKRAKEERENPELREQRLKENVTQTIENTRVYDETINK--EVEGDEDDLMRYFNSNSNEPPKNAKKSAYEFANILIEILPNVT------------------ |
8 | 6ybtu | 0.04 | 0.04 | 0.85 | 1.09 | SPARKS-K | | ----------QTIEERKERLESLNIQREKEELEQREAELQKVRKAEEERLRQEAKEREKERILQEHEQIKKKTVRERLEQIKKTELGAKAFKDIDIEDLEELDPDFIMAKQVEQLEKEKKELQERLKNQEKKIDYFERAKRLEE------------- |
9 | 6shdA | 0.19 | 0.08 | 0.43 | 0.38 | CNFpred | | -----------YNVGTYIGAANLLHQATGEGMYLDDAIKSASSVVAPGELTTG--------------------------------------------------------GVLKNEGQGDGGLFKGILVRYFTQLA---------------------- |
10 | 6xmpA | 0.04 | 0.03 | 0.78 | 0.83 | DEthreader | | VFEGLAG-LA-TILVIGAAHALNSDI-IRRFASAVKIRIPNYDEISFTRSGTVHVAKEVGIVF---T--KLSKQRPQSVYISIQFHILQQVTFAVNYQG--------------GLGVTGLALASATEF--MTD-DFKIKLLTLLLDFF--------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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