>PF15710 (679 residues) MTKRKKLRTSGGEGIRPPKLPKNPRLGDSGRPPQSSEWGCLCLPEASEGRSGPVPSAEQR TEEPVQAASSSPAEEAQAPAGLHGEPEKEPAPLPLSQNSARRFVPQFAKSRKTVTRPAEL REEDLRSRIPKIRQETPPGPSSQQARSRLQEESLGLASWEAREPGAQTQVDSTHPEHRDQ NLMTPVPESGDSPPSASTNVSPERGMVPLASERASQDHLSEQGTNTPDGESRKGCWVLGY HGQKGLLLSSDAEEKEPDRGSLQEAGVQGGAEADLPEGHREKGDSVLGPSSTQGPEPGSA DQALSDPMQIPSKTSREAEQSCSGPSHSSLGTVVITDRRTDPTEPERRAPEVAKPDEQAN TRAPSSPSGKAPDGGHSGALLSCTLLTGEAGGRREARWEDKPPGNILGGPLGSLALDRRI KEPIVGAGDSSLLASEVGPPVDQTRAPGLDEEGLGGICALPLLLQPEGEKAAELRSQSPK EDLDWFNLSLGAFAPPVHREAVGGPSQETRACHDHPGAPEDPTGWSEPPPGSADQALLGE SPAMEPHFLPDSQIRDALEVPDLAASPEQLFPLGSRLDSRWPGTSLHADGGPLTDFQLRT CVGIKACEAARMEDATDTVRGLVVELSNLNRLIMSTHRDLEAFRRLNYRKARPAGKAPAP YTSKGAGNLPPGERSWRDL |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520 540 560 580 600 620 640 660 | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | MTKRKKLRTSGGEGIRPPKLPKNPRLGDSGRPPQSSEWGCLCLPEASEGRSGPVPSAEQRTEEPVQAASSSPAEEAQAPAGLHGEPEKEPAPLPLSQNSARRFVPQFAKSRKTVTRPAELREEDLRSRIPKIRQETPPGPSSQQARSRLQEESLGLASWEAREPGAQTQVDSTHPEHRDQNLMTPVPESGDSPPSASTNVSPERGMVPLASERASQDHLSEQGTNTPDGESRKGCWVLGYHGQKGLLLSSDAEEKEPDRGSLQEAGVQGGAEADLPEGHREKGDSVLGPSSTQGPEPGSADQALSDPMQIPSKTSREAEQSCSGPSHSSLGTVVITDRRTDPTEPERRAPEVAKPDEQANTRAPSSPSGKAPDGGHSGALLSCTLLTGEAGGRREARWEDKPPGNILGGPLGSLALDRRIKEPIVGAGDSSLLASEVGPPVDQTRAPGLDEEGLGGICALPLLLQPEGEKAAELRSQSPKEDLDWFNLSLGAFAPPVHREAVGGPSQETRACHDHPGAPEDPTGWSEPPPGSADQALLGESPAMEPHFLPDSQIRDALEVPDLAASPEQLFPLGSRLDSRWPGTSLHADGGPLTDFQLRTCVGIKACEAARMEDATDTVRGLVVELSNLNRLIMSTHRDLEAFRRLNYRKARPAGKAPAPYTSKGAGNLPPGERSWRDL | |||||||||||||||||||
1 | 5jcss | 0.07 | 0.07 | 0.97 | 1.78 | SPARKS-K | PSRGETVKAANGFQLSTVRINEDHQKDSSNKIYNLNMIGMRIWNVIE---LEEPSEEDLTHAQKFPILTNLIPSIYMNTKFISLNKGAHTRVVSVRDERLDILFKNNGINKPDQLIQSSVYDSIFSEAADCF-AGAIGEFKALEPIIQAIGESLDILFLTQHVPTLENLDDSIKIGRAVLLKEKLNIQKKSMNSTLFAFTNHSLRLMEQQQLAKMLADLLGGYKPKTVAVPIQENFETATFSLKKNEKFHKMLHRCFNKNQWKNVVKLWNEAYKMAQSILKITNTENENENAKKKKRRLNTHEKKLLLDKWADFNDSVKKFEAQSSSIEGEWLLLDEVNLATADTLESISDL-LTEPDSRSILLSEKGDAEPIKAHPDRIFACMNPATDVGKRDEIYVHSPERDITDLLSIIDKYIGKYSVSDEWVGNDIAELYLEKKLSDNNTIVDGSNQKPHFSIRTLTRTL-----LYVTDIIHIYGLRRSLYGFCMSFLTLLDQKSEAILKPVIEKFTLGRLKNVKSIMSYIITPFVEKNKYLADIHEHTDLQEYLGTYVTDDLDELNL-APTDELFPETQEVVHPHPDPPGIYGGRKILSRAFRNRFLELHFDDIPQDELEIILR------ERCQIAPSYAKKIVEVYRQLSIERSASRL-----FEQKNSFATLRDLFRWALR | |||||||||||||
2 | 1zlgA | 0.10 | 0.09 | 0.88 | 1.22 | MUSTER | AAAARRLDESLSAGSVQRARCASRCLSLQITRISAFFQHFQGSLVWCQNHKQCSKCLEPCKESGDLRKHQCQSFCEPLFPKKSYECLTSCEFLKYILLVKQGDCPAPEKASGFAAACVESCEVDNECSGVKKCCSNGCGHTCQVPKTLYKGLKPRKELRFTELQSGQSSKFNISIEPVIRRWNYGIHPSEDDATHWQTVAQTTDERVQLTDIRPSRWNVHGTRGFTAPSKHFRSSKDPSAPPAPANLRLANSTVNSDGSDLPEEPDIPVHHWSWMVSSKSLVPTKKKRRKTTDGFQNSVILEKLQPDCDQAITYWGQTRLKSAKVSLHFTSTHATNNKEQLVKTRKGGIQTQLPFQRRRPTRPLEVGAPFYQDGQLQVKVYWKKTEDPTVNRPEACAHNRTTGSEASSGMTHENYIILQDLSFPIRPKSHSKAEAVFFTTPPCSALKGKSHKPIGCLGEAGHVLSKVLAKPENLSASFIVQDVNITKMAKANLYQPMTAEVTTESRQNSLPNSIISQSQILPSDHYVLRPSTL-QVL-GEGPATIKTF-----------RTPELPPSSAHRSHLKHRHPHHYKPSPERYGKPIPNPLLGLDSTRTGHHHHHH------------------------------------------------------------------- | |||||||||||||
3 | 1ti4K1 | 0.08 | 0.06 | 0.78 | 0.58 | DisCoVER | ----VRLTNSSTGGPVMTPMDFDAPSWKIEARGKTFTPPRKTSI------APYTAKSMIYSDLRIPYPMKRKSFQLRGAGLSKQDPWS-DYERISWAIVEIIGPSAILST--PSSHH-----MWGNVGYRMGFTYADHNPDSWEGWHWG---GMHMWGFSWRLG-NPEQYDLAMIVFWSSDGDFVFIDPTAKWFSPKTDHALSFAIAYTWLKEDSYDKEYVAANAH--GFEEWADYVLGPKTCEWAEESG-V---PACIRLAWAKNTYLAAGGLGG-WGGACRASHGIEWARGMIALATMQGMGKPGSNMWSTTQG----VPLDYEFYFPGYAEGGIS-------------GD------------------------CENSAAGFFAWRM-----F-------DGKTTFPSPSNLNTSAGQHIPR-----LKIPECIMGGKFQWSGKGF----AGGDISHQLHQYE-------Y--------PAPGYSKIKMFWKYG------------GPHLGTMTATNRYAKMY---------------THDSLEFVVS-QSI-WFEGEVPFADIILPACTNFER--WDISEFANCSYQLCNHRVISLQAKCI-EPVGESMSDYEIYRLFELAWCEQYFGYFVV-PDNPNRKKTVALRWFATPDWGPLQTYISAC-GMANN------ | |||||||||||||
4 | 1vt4I3 | 0.10 | 0.08 | 0.75 | 0.89 | CEthreader | LDFLPKIEENLICSKYTDLLRIALMAEDEAIFEEAHKQVQRGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG---GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG--------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
5 | 4cr2Z | 0.06 | 0.06 | 0.92 | 0.97 | EigenThreader | LELLVERLKEDDSSLYEASLNALKESIKNSTSSMTAVPKPLKFLRPTYPDLCSIYDKWTDPNLKSSLADVLSILAMTYSENGKHDSLRYRLLSDVSDF-----------------------------------EGWGHEYIRHLALEIGEVYNDQVEKDAEDETSSDGSKSDGS---AATSGFEFSKLLEIESIDKLPQFVDENTFQRVCQYMVACVPLLPPPEDVAFLKTAYSIYLSQNELTDAIALAVRLGEVFDATSDPVMHKQLAYILAAQKTSFEYEGVQDIIGNGKLSEHFLYLAKELNLTGPKVPEDIYKSHLDNSKSVFS----------SAGLDSAQQNLASSFVNGFLNLGYCNDVYKTKGDGMTSAVASIGSIYQWNLDGLQQLDKYLYVDEPEVKAGALLGIGISASGVHDGEVEPALLLLQDYVTN-------PDTKISSAAILGLGIAFAGSKNLLLPIAASTDLAAMASLALAHVFVGTCNGDITTSIMDNFLERTAIELKTDWVRFLALALGILYVDDVLETISAIEHPMTSAIEVLVGSCAYTGTGDVLLIQDLLHRLTLAYAVLGIALIALGEVPLAMGIVSVSDPQMKVFDTLTRFSIFAMGLCGAQLLRQLASDALFITRLAQGLLHVRVGQPVLLNHGERAELETDEYISYTSHIEGV | |||||||||||||
6 | 2nvuB | 0.20 | 0.09 | 0.48 | 0.48 | HHpred | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGYAQSGLLA-----EITPDK-AFQDKLYP-FTWD----AVRYNGKLIAYPI-A-VEALSYNKDLLPNPPKTWEEIKGKSALMADAFKYE-NGKYDIKDVGVDNAGAK--AGLTFLVDK----------NKHNADTDYSIA-------EAAFKG--------ETA--MTIGPWAWS----------N--IDTSKVNVTVLPTFGQPSKPFVGV--------LS-----AGINAAS-----PNKE---LAKEFLENYLLTDEGLEAVNKDNAQKGEIMPNIPQMAASG--RQT---VDAALAAA-QTNAAADWEGRWNKFLERSGPFTHP-----------DFEPSTE------SLQFLTCKVVIGAGGCELLK-NLALSGFRQITIDVSNLNRQFLFRPKDIGRPKAENDRV--P-NCNVVPHFNK--------------- | |||||||||||||
7 | 2pffB | 0.14 | 0.08 | 0.57 | 0.98 | MRFsearch | --DDYGFKQGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-----------------------------------------------------------------------------------------------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG---------------------------------------------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-------------------------------------------------GGGGGGGGGGGGGGGGGG----------------------------------------------GGGGGGGGGGGGGGGGGGGGGQGSQ---------------------EQGMGMDLYKTSKAAQDVWNRADNH------------------------------------ | |||||||||||||
8 | 3cnfB | 0.08 | 0.08 | 0.99 | 0.78 | FFAS-3D | FTKKDKLRASEADGAAVVNIDLNRDFFDTAGIPLVQDLLVPIGVTAGAEQSAEYVSLDNRLVIVGETTTPMSNTLSTVVNNVLRTTYHNNVGVNPALLRDFTQVNWLNRDITNMLQQAGTKTETRLDYVRLVKTIVGHALNIDHFAASVLNINLRALMEANVTADDRIKALQAHSQGALRPELAFDHDHIIRCLMLAAANYPRLEGIIVQRPVSEKRYFPENLEQNQSAARLVSAVKARASADISSIHLAIAREVSPMFNVHE------LKKIAESFEDPSSIVVVLEFILFALFFPTEFNRIKGDIQNVLLLFTINAAGEFEFSGRNEKWDALFSDVPLAGANTIIAIMRLFTPQGFLRTDDLAI-AANFPRASRNPQVATLANVVNERAVQDDMQKATRSCTKQWLRHLETQFDNIASVVYATMSNFMLNFTNNFATHVAVVLYQSGVINGPASTEVLVVMPDYYDVVSRFLSTSQIRHAIERIAQITDVDSTFLGTLTRSLKMQNAQIRRIRPDGTVLRYDDQIDIEAFRWSRYFLDELQLRLRLITNPRIARRFNGDDDPDPAHRLFSSSLANKRNRVTYTHPPTGMAYPSPTPHVHMTINERAGMSKLVADNIIASVVVDILDIEYTAEVMTPSEGYTQHVDAESIMTAPKGKLFHLQEASGEDMRLIYPLQPI | |||||||||||||
9 | 6zu9p | 0.09 | 0.08 | 0.90 | 1.65 | SPARKS-K | ------------EFNFDQYIVVNGAPVIPSAKVPVLKKALTSLFSKAGKVVNMEFPIDEATGKTKGFLFGSMNDAKKIIKSFHGKRLDLKH----------RLFLYTMKDVERYNSPSSSLKSWLMDD-KVRDQFVLQDDVKTSVFWNSMFNEEDSLVESRENWSTNYVRFSPKGTYLFSYHQQGVGPNFDRLRRFYHPDVRNSSVSPNEKYSTEPIIVEEDNEFSPFTKKNECIWDIASGLLMATFPVIKSPYLKWPLVRWSYNDKYCARMVG---------DSLIDATKNFMPLEAKALKPSGIRDFSFAPEGVKLQPFRNGDEPS--VLLAYWTPETNNSACTATIAEVPRGRVLKTVNLVQVSNVTQNQAEFLCFNVERHTKSGKTQFSNLQICRLTERD----IPVEKVELKDSVFEFGWEPHGNRFVTISVHEV---ADMNYAIPANTIRFYAPETKEKTDVIKRWSLVKEIPKTFANTVSWSPAGRFVVVGALV-GPNMRRSDLQFYDMDYPGEKNINDNNDVSASLKDVAHPSAATNITWDPSGRYSSLKHKVEHAGNLVKEDIIAGFKNFAWRPRPSILSNAERKKRKNLREWSAQFEEQDAMEADTDLILHQRELLKQWTEYREKIGQEMEKSMNFKIFDVQP-------------------------- | |||||||||||||
10 | 3cmuA | 0.05 | 0.03 | 0.64 | 0.67 | DEthreader | TIDAALEICDALARSGVVIVVD-----------------M-KLAGNLKQSNTLLFYASVRKNPQAEFQIEGINFYGELVIWYSYKITEIEKKVR-----------IALGAGLPMGRIKTICDALA--RSGAVDVIVNTLLIF-NQI-------------NALK-YA-VRLDIRRIGASETRV------------FQILYGEGINFYGEVGQGKANAT-------------IALGA--L--GRIVEIYGP--SGKTLTVIVVSVLMMSA-LIFINQIRMKIVMFGNPETTTGG---------LDIRRST------------------VEIYGPESSGTEHALDPCSQPVDSFINQIVRLDIRRIGAVK-EGENVVGSETRVQAEFQILYGEGINFYGEVKANT-----------------------SMD-E-IS--SLSLDIA--------------GAGGLPMGRVIAQKTCAFALVALALTLLIFI----------------------------------------------------AEFQILYGEGIN--G--VD--KAGAWYSY-GEK------I-GQGKA-------------------AWLKDNPETAK--------DVLGA-GLPMGRIVEIYVVDSVAALTPKAEIEMGLAARMMSQAMR-----TTGGNK | |||||||||||||
|
|
References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |