>PF15704 (187 residues) AKEAAPPALKGDTMLKNIFVELKNKYETAIGLLKKEKITIDPEDPAAVSHYAQVMKTIRE KASLSSESQHIQESIETQTADIPDARTYLLTLKEIRIKSGLADDLGAEALMIEALEKIEK DLKKPLLRNDKKGMDLLLAEFDKINKKLGIQKENLPKYEEKLELSIAKAQLEELKKDALE AIETQSK |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | AKEAAPPALKGDTMLKNIFVELKNKYETAIGLLKKEKITIDPEDPAAVSHYAQVMKTIREKASLSSESQHIQESIETQTADIPDARTYLLTLKEIRIKSGLADDLGAEALMIEALEKIEKDLKKPLLRNDKKGMDLLLAEFDKINKKLGIQKENLPKYEEKLELSIAKAQLEELKKDALEAIETQSK | |||||||||||||||||||
1 | 6rd44 | 0.16 | 0.15 | 0.94 | 1.04 | HHpred | --GAQVEAT-ETD-ASELIAQLEKKYLSAEPGVHNIALPLGESGSAPVKRYAAELFNLGAQAGFECPFIEVSKKFGQETATSETVKDVLNKTKSY---V----SADYNAALNEVLSSVEAEINGPVLFDKTEGFKKFAAKAKAVAVSRGLPADTFFTWFESAYTADAAAEVKAIEAEAASILDRHLA | |||||||||||||
2 | 6rd44 | 0.16 | 0.15 | 0.94 | 1.63 | HHsearch | AQV---EAT-ETD-ASELIAQLEKKYLSAEPGVHNIALPLGESGSAPVKRYAAELFNLGAQAGFECPFIEVSKKFGQETATSETVKDVLNKTKSY---V----SADYNAALNEVLSSVEAEINGPVLFDKTEGFKKFAAKAKAVAVSRGLPADTFFTWFESAYTADAAAEVKAIEAEAASILDRHLA | |||||||||||||
3 | 6rd44 | 0.16 | 0.15 | 0.96 | 1.05 | FFAS-3D | -AGAQVEATETDASELIAQLEKKYLSAQVVEPVHNIALPLGESGSAPVKRYAAELFNLGAQAGFECPFIEVSKKFGQETATSETVKDVLNKTKSYVSAD-------YNAALNEVLSSVEAEINGPVLFDGKEGFKKFAAKAKAVAVSRGLPSKEFFTWFESAYTADAAAEVKAIEAEAASILDRHLA | |||||||||||||
4 | 5xbjA | 0.04 | 0.04 | 0.87 | 1.00 | DEthreader | DEYSKLKGASTQLEYTKYMASTLQEIAQRFPDLNTGQDENYNKALKASQTLTESVNNTFATLDYMLDTFAKT-----LSG-LKG-DIPLVNYD-RT------I---QPGSFITIMDIMRQINA--ASFSY--FQINAKV-AIEDK--NSDMANKIIQLQ-KTMEEYYRKLTGKIASDGENNNVVNSS | |||||||||||||
5 | 6rd44 | 0.11 | 0.09 | 0.81 | 0.83 | DEthreader | FLSSSTAV------AQVVEPGVHN-IALPLE-GSAPVK------------R--YAAELFNLGAFECPFIEVSKKFGQETATSETVKDVLNKTKSYV------S-ADYNAALNEVLSSVEAEINGPLFDGKTEGFKKFAAKAKAVAVSRGLPADTIFTWFESAYTADAAAEVKAI-EA-----YLYVV | |||||||||||||
6 | 1eq1A | 0.13 | 0.09 | 0.66 | 0.78 | DisCoVER | -SKNTQDFN--K-ALKDGSDSVLQQL-SA--FS-SSLQGAISDANGAKEALEQARQNVE--KTAEELRKAHP--DV--EKEAAFK--------------------------------------KLQVQTTVQESQKLAKEV-----SNME--ETNKKLKIKQAYDDFVKHAEEVQKKLHEAA--T-- | |||||||||||||
7 | 6rd44 | 0.16 | 0.14 | 0.90 | 0.57 | MRFsearch | -----------ETDASELIAQLEKKYLSAQVVEHNIALPLGESGSAPVKRYAAELFNLGAQAGFECPFIEVSKKFGQETATSETVKDVLNKTKSY-------VSADYNAALNEVLSSVEAEINGPVLFDKTEGFKKFAAKAKAVAVSRGLPADEFFTWFESAYTADAAAEVKAIEAEAASILDRHLA | |||||||||||||
8 | 5cwjA | 0.14 | 0.11 | 0.82 | 0.79 | SPARKS-K | -----------------DSEEEQERIRRILKEARKSG------TEESLRQAIEDVAQLAKKSQDSELEEAIRVILRIAKESGEALRQAIRAVAEIAKEA---QDSEVLEEAIRVILRIAKESG------SEEALRQAIRAVAEIAKEAQD--PRVLEEAIRVIRQIAEESSEEARRQAERAEEEIRR | |||||||||||||
9 | 6rd44 | 0.14 | 0.12 | 0.89 | 0.89 | MAPalign | -----------ASELIAQLEKKYLSAQVVEPGVHNIALPLGESGSAPVKRYAAELFNLGAQAGFECPFIEVSKKFGQETATSETVKDVLNKTKSYV-------SADYNAALNEVLSSVEAEINGPVLFDKTEGFKKFAAKAKAVAVSRGLPAKEFFTWFESAYTADAAAEVKAIEAEAASILDRH-- | |||||||||||||
10 | 6rd44 | 0.14 | 0.13 | 0.96 | 0.89 | CEthreader | AGAQVEATETDASELIAQLEKKYLSAQVVEPGVHNIALPLGESGSAPVKRYAAELFNLGAQAGFECPFIEVSKKFGQETATSETVKDVLNKTKSY-------VSADYNAALNEVLSSVEAEINGPVLFDGKEGFKKFAAKAKAVAVSRGLPSKEFFTWFESAYTADAAAEVKAIEAEAASILDRHLA | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |