>PF15700 (305 residues) SSNRPISAHLTIHYKAIQEEEGEDMRSGAGSGGHHDDYFLESNRSPTPNKKHEFIKTVLN INDNDSEFSESCSPREKLHNERACNTDLFGDFMSKRQQRLSNSMNIYDLYQCVHNLSPSN NNHQFIARRFSDSHIPSLHHRQQQQKVTTKNFVQPTKDIQRIASYAADSDQRVKYLPNYH QSAPSTALSAAESKAAVPRKLPDRDSTQNYVLKLQLSSPNSQPMSPRTRPGYRPSCSSSN CSSSSSSSACSSVSISDPNNITAYETNNVNPQFPSNQPLDISSPCARHHHRRNSIAVKFD KALYK |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 | | | | | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | SSNRPISAHLTIHYKAIQEEEGEDMRSGAGSGGHHDDYFLESNRSPTPNKKHEFIKTVLNINDNDSEFSESCSPREKLHNERACNTDLFGDFMSKRQQRLSNSMNIYDLYQCVHNLSPSNNNHQFIARRFSDSHIPSLHHRQQQQKVTTKNFVQPTKDIQRIASYAADSDQRVKYLPNYHQSAPSTALSAAESKAAVPRKLPDRDSTQNYVLKLQLSSPNSQPMSPRTRPGYRPSCSSSNCSSSSSSSACSSVSISDPNNITAYETNNVNPQFPSNQPLDISSPCARHHHRRNSIAVKFDKALYK | |||||||||||||||||||
1 | 3g9hA | 0.07 | 0.05 | 0.69 | 0.77 | DisCoVER | -QFGLNASIAEVLNASFK---------------------------DGMLQNSQLIGEIALNYLPNS------------------------------VMNSPLPIGINLRINNGA-KF----EKVILEEFKVNPSFIDS-------------------RTLGAIKYSIK---EPIAPIVIHPV------WRFESHQASVVLTVKMSQIVIEDLVVFVNIDGANATSALSKPQGSFSKEKKRITWR-FKEPVVLTRNGEGQRLIARFITDGLAHEGVITFTIGSITLTCQEVNTKRTLTTGNY-HG- | |||||||||||||
2 | 4a01A | 0.03 | 0.02 | 0.70 | 0.67 | DEthreader | LVCAVI-----GIAFA---FQWLLVSKVKLV-----KIATYANARTAFITFRAVMGLAANGLLVL--Y----------IAINL--F-KIYYGDDWG-LF--ITGYGLGGSSMALFGVGGGIYVGGMDLFSYASAPSGMTVFLCVSFFAAMYGIAVAALMLIGLDA---I-NNAGKAAAVSLAFGAFVAVVFIGLIVGAM-L-PYW-FS-AMTMKSV--A-----------SDASIKEMIPP-------------GALVMLTP-VVFT-----GSLVVNILIKLM--------------------- | |||||||||||||
3 | 1vt4I3 | 0.02 | 0.02 | 1.00 | 0.67 | CEthreader | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG | |||||||||||||
4 | 3b5wA | 0.07 | 0.07 | 0.99 | 0.63 | EigenThreader | APFKAGLIVAGVALTFMLSLLKPLLDDGFGKTDRSVLVWMPLVVIGLMILRGITSYVSSYCISWVSGKGHMMGMPVSFFDKQSTGTLLSRITYDSEQVASSSSGALITVVREGASYAASFPSVRPLKSLTNVNAQFQRGMAACQTEGKRVIERATGDVEFRNVTFTYPGRDVPALRNILVGRSGSGKSTIASLITRFYDIDEGEIL----MDGHDLREYTLASLRNQVNVHLFNDTVANNIAYARTEQYSAYAMDFINKMDNGLDTVIGENGVLLSGGQRQRIAIARALLRDSPILILDEARAIQ | |||||||||||||
5 | 2pffB | 0.18 | 0.11 | 0.63 | 0.46 | HHpred | VINNPV--NLTIHFGGEKGKRIREN--YSAMIETIVDGFKEINEHST-SYTFRSEKGLLSATQFKAAFEDLKSK-GLIPADATFAGHSLGEYAA--LASLADVMSIESLVEVVFYRELGRSNYGMIAINPGRVAASFSQEALQYVV---ERVGKRTGWLVEIVNYNVENQQYVAALRALD----------TVTNVLNFIKLQKIDLQKSLSLE-------------------------------------------------------------------------------------------- | |||||||||||||
6 | 2pffB | 0.14 | 0.04 | 0.28 | 0.65 | MRFsearch | ---TQFKATHILDFGP-------------GGASGLGVLTHR--------GVRVIVAGTLDINPDDDYG---------------------------GSQEQGMGMDLYKTSKAAQDV------WNRADNHFKD-------------------------------------------------------------------------TYGFSILDIVI----------------------------------------------------------------------------------------- | |||||||||||||
7 | 4bmlA | 0.08 | 0.08 | 0.95 | 0.42 | FFAS-3D | -----------VRYATALKLFSGEVFTAFNNASIFKGLVRSYDLRGGKSKQFMFTGKLSGIKANEKTLVMDDLLVSSQFVYSLDEIFSQYSTRAEVSKQIGEALTHYD-ERIARVLAKASAEASPVTGEPGGFHVNIGAGNTNDAQAIVDGFFEAAAVLDERSAPQEGSPRQYYSLISSVDTNILNREIGNSQGDMNSGKGLYSIAGIRILKSNNLAGLYGQDLSSAAVTGENNDYQVDASALAGLIFHREAAGCIQSVAPTIQTTSGDFNVQYQGDLIVGKLAMG-CGSLRTSVAGSFQAA--- | |||||||||||||
8 | 5jcss | 0.09 | 0.09 | 0.97 | 1.01 | SPARKS-K | CHDSIVKIHL-----GEQTDAKLLIGTYTSGDKPGTFEWRAGVLATAVKEGRWVLIEDIDKAPTDPSRGETVKAANGINEDHQKDSSNKIYNLNMIGMRIWNVIELEDLTHILAQKFPILTNLPKLIDSYKNVKSIYMNTKFISLNKGAHTRVVSVRDLIKLCERLDILFKNNGINKP-DQLIQSSVYDSIFSEAADCFAGAIGEFLEPIIQAIGESLDIASSRISLFLTQHVPTLENLDDSIKIGRAVLLKEK--LNIQKKSMNSTLFAFTNHSLRLMEQISVCIQMTEPKTTVVQQLAKMLAK | |||||||||||||
9 | 3i5vA | 0.10 | 0.02 | 0.22 | 0.59 | CNFpred | ------KGFVYTKIEKN-------------------------------GKNVHVIGTHTQSED---------------------------SRCGAGHDRKIRAEQMKEISDFVKKKNIPKDETVYIGGDLN------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ | |||||||||||||
10 | 6ar6A | 0.08 | 0.06 | 0.67 | 0.67 | DEthreader | -----------------------DYNKFFRKRMFPDVKSLSLLQEICNVNIQERIEEKNKDEFIEISALDLKNLHI-D----TDEGFSVETEKTIFSEYANHI------------------------------EISKIKGTI-FDTVNGKNLDTTHEVNLN-----------------LPTLSEGPAAIKELSTRLTTTITSLGIASGFSLVPLGISAKDYKHVVFTLLKIMVIVPII-TTE-----Y-IR-KLSYSF----S-Y---TIESDKI-KKGD-IEGI-------NSHEISLIELLPY | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |