>PF15698 (263 residues) LRAHLLAARLAGPVATSREESLRSYRLFAARDPRVLLGLDPEWTWQQRDLIELMADKCGV SADPTHTTGHDVIDPERTLAALDAFAERVEEAARNREPVLLGTGHPHRLIGFYAALADAL SAAGCTVLTPAQGSCVDITTRFGLRTYNLDYVQGVALVREPGVRDTGRATGAHTHSPLPV RTALAAAAESGGPLPELVIGDHGWVCGAGQLGFEAMGLADTDDPALFVGEAEGRVSVVVP LDDAVRSDYYRPLTRYVLNRACL |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 | | | | | | | | | | | | | | |||||||||||||
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Seq | LRAHLLAARLAGPVATSREESLRSYRLFAARDPRVLLGLDPEWTWQQRDLIELMADKCGVSADPTHTTGHDVIDPERTLAALDAFAERVEEAARNREPVLLGTGHPHRLIGFYAALADALSAAGCTVLTPAQGSCVDITTRFGLRTYNLDYVQGVALVREPGVRDTGRATGAHTHSPLPVRTALAAAAESGGPLPELVIGDHGWVCGAGQLGFEAMGLADTDDPALFVGEAEGRVSVVVPLDDAVRSDYYRPLTRYVLNRACL | |||||||||||||||||||
1 | 5mmmb | 0.13 | 0.09 | 0.71 | 1.00 | DEthreader | INLEEMMEAGVHFG-HGT-RKW--N-------------------------P-RMSPYISA-----KCKGIHIINLTRTARFLSEACDLVFDASSRGKQFLIVGTK-NKAADSVARAAIRAR----CH-YVNKKWLGGMLTNWSTTERLHKF------------------------Q-SHLQTYLGGIK-YMTGLPDIVIIVQEALRECITLGIPTIC-LIDTNCN-PDL-----ADISIPANDD-AIASIRLILTKLVFAICE | |||||||||||||
2 | 5mmmb | 0.11 | 0.09 | 0.80 | 1.00 | DEthreader | INLEEMMEAGV-HFG--H-G-TRKW-------------------------NPRMSP-YISA----KCKGIHIINLTRTARFLSEACDLVFDASSRGKQFLIVGTKNKAADSVARAAIR--A----RCHYVNKKWLGGMLTNWSTTETRLHKFRDLR-EQRLARLPKR-DAAVVKRQLSHLQTYLGGIKYM-TGLPDIVIIVEYALRECITLGIPTIC-LIDTNCN-PDL-----ADISIPANDDA-IASIRLILTKLVFAIEG | |||||||||||||
3 | 5o5jV | 0.19 | 0.16 | 0.81 | 4.43 | HHpred | --------------------AVVTMKQLLD--SGAHFGH-QTRRWNPKM-----KRF-----IFTDRNGIYIIDLQQTLTYIDKAYEFVKETVAHGGTVLFVGTKK----QAQESIAEEATRVGMPYV--NQRWLGGMLTNFSTVHKRLQRLKELEAMEQTGGGRTKKEILMLTREKNKLERSLGGIRD-MQKVPSAVWVEHIAVGEARKLGIPVIAILDTNDPDV--------VDYPIPGNDDA--IRSAALLTKVIASAVA | |||||||||||||
4 | 5ng8Ab | 0.13 | 0.11 | 0.80 | 0.86 | DisCoVER | IMKQLLEAGVHFGHQT---RR---W-----------NKM------------KKY---IFTE-----RNGIYIIDLQKTVKKVDEAYNFLKQVSEDGGQVLFVGT----KKQAQESVKSEAERAGQ--FYINQRWLGGLLTNYKTISKRIKRISEIEKMEEDLFEVLPKKEVELKKEYDRLIKFLGGIR-DMKSMPQALFVDPRKERNAIAEAIPIVGIVDTNC--DP-----DEIDYVIPANDDA-IRAVKLLTAKMADAIL- | |||||||||||||
5 | 5o5jV | 0.19 | 0.15 | 0.79 | 0.65 | MRFsearch | --KQLLDS-------------------------GAHFGHQ-TRRWNPKMKRFIFTDR----------NGIYIIDLQQTLTYIDKAYEFVKETVAHGGTVLFVGTK----KQAQESIAEEATRVGMPYVN--QRWLGGMLTNFSTVHKRLQRLKELEAMEQTGEGRTKKEILMLTREKNKLERSLGGIRDM-QKVPSAVWVVDIAVGEARKLGIPVIAILDTNCDP-------DVVDYPIPGNDDAI--RSAALLTKVIASAVA | |||||||||||||
6 | 5ng8Ab | 0.16 | 0.13 | 0.81 | 1.58 | SPARKS-K | ------------MAVISMKQLLEA---------GVHFGHQT-RRWNP-----KMKKYI-----FTERNGIYIIDLQKTVKKVDEAYNFLKQVSEDGGQVLFVGTK----KQAQESVKSEAERAGQ--FYINQRWLGGLLTNYKTISKRIKRISEIEKMEEDGLVLPKKEVVELKKEYDRLIKFLGGIRD-MKSMPQALFVERNAIAEARKLNIPIVGIVDTNDPDE--------IDYVIPANDDA--IRAVKLLTAKMADAIL | |||||||||||||
7 | 2aw7B | 0.13 | 0.10 | 0.79 | 0.68 | MAPalign | -------MLKAGVHFGHQ---------------------------------TRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELNKIASRKGKILFVGTK----RAASEAVKDAALSCDQFFVN--HRWLGGMLTNWKTVRQSIKRLKDLETQSQDGTFLTKKEALMRTRELEKLENSLGGIK-DMGGLPDALFVIAIAIKEANNLGIPVFAIVDTNS--DP-----DGVDFVIPGN-DDAIRAVTLYLGAVAATVR- | |||||||||||||
8 | 5o5jV | 0.18 | 0.14 | 0.79 | 0.66 | CEthreader | -----------------------------------------MAVVTMKQLLDSGAHFGHQTRRFTDRNGIYIIDLQQTLTYIDKAYEFVKETVAHGGTVLFVGTK----KQAQESIAEEATRVGMPYVN--QRWLGGMLTNFSTVHKRLQRLKELEAMEQTGGGRTKKEILMLTREKNKLERSLGGIRDM-QKVPSAVWVVHIAVGEARKLGIPVIAILDTNCD-------PDVVDYPIPGNDDA-IRSAALLTKVIASAVAE | |||||||||||||
9 | 5o5jV | 0.19 | 0.16 | 0.81 | 1.14 | MUSTER | -------------------MAVVTMKQLLD---GAHFG-HQTRRWNPKMKRFIF----------TDRNGIYIIDLQQTLTYIDKAYEFVKETVAHGGTVLFVGTK----KQAQESIAEEATRVGMPYVN--QRWLGGMLTNFSTVHKRLQRLKELEAMEQTGGFRTKKEILMLTREKNKLERSLGGIRDMQKV-PSVWVVDHIAVGEARKLGIPVIAILDTNDPDV--------VDYPIPGNDDA--IRSAALLTKVIASAVA | |||||||||||||
10 | 5o5jV | 0.19 | 0.16 | 0.81 | 2.79 | HHsearch | -------------------MAVVTMKQLLD--SGAHFGH-QTRRWNPKM-----KRF-----IFTDRNGIYIIDLQQTLTYIDKAYEFVKETVAHGGTVLFVGTKK----QAQESIAEEATRVGMPY--VNQRWLGGMLTNFSTVHKRLQRLKELEAMEQTGGGRTKKEILMLTREKNKLERSLGGIRD-MQKVPSAVWVEHIAVGEARKLGIPVIAILDTNDPDV--------VDYPIPGNDDA--IRSAALLTKVIASAVA | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |