Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200 220 240 260
| | | | | | | | | | | | | |
| Seq | LRAHLLAARLAGPVATSREESLRSYRLFAARDPRVLLGLDPEWTWQQRDLIELMADKCGVSADPTHTTGHDVIDPERTLAALDAFAERVEEAARNREPVLLGTGHPHRLIGFYAALADALSAAGCTVLTPAQGSCVDITTRFGLRTYNLDYVQGVALVREPGVRDTGRATGAHTHSPLPVRTALAAAAESGGPLPELVIGDHGWVCGAGQLGFEAMGLADTDDPALFVGEAEGRVSVVVPLDDAVRSDYYRPLTRYVLNRACL |
1 | 5mmmb | 0.13 | 0.09 | 0.71 | 1.00 | DEthreader | | INLEEMMEAGVHFG-HGT-RKW--N-------------------------P-RMSPYISA-----KCKGIHIINLTRTARFLSEACDLVFDASSRGKQFLIVGTK-NKAADSVARAAIRAR----CH-YVNKKWLGGMLTNWSTTERLHKF------------------------Q-SHLQTYLGGIK-YMTGLPDIVIIVQEALRECITLGIPTIC-LIDTNCN-PDL-----ADISIPANDD-AIASIRLILTKLVFAICE |
2 | 5mmmb | 0.11 | 0.09 | 0.80 | 1.00 | DEthreader | | INLEEMMEAGV-HFG--H-G-TRKW-------------------------NPRMSP-YISA----KCKGIHIINLTRTARFLSEACDLVFDASSRGKQFLIVGTKNKAADSVARAAIR--A----RCHYVNKKWLGGMLTNWSTTETRLHKFRDLR-EQRLARLPKR-DAAVVKRQLSHLQTYLGGIKYM-TGLPDIVIIVEYALRECITLGIPTIC-LIDTNCN-PDL-----ADISIPANDDA-IASIRLILTKLVFAIEG |
3 | 5o5jV | 0.19 | 0.16 | 0.81 | 4.43 | HHpred | | --------------------AVVTMKQLLD--SGAHFGH-QTRRWNPKM-----KRF-----IFTDRNGIYIIDLQQTLTYIDKAYEFVKETVAHGGTVLFVGTKK----QAQESIAEEATRVGMPYV--NQRWLGGMLTNFSTVHKRLQRLKELEAMEQTGGGRTKKEILMLTREKNKLERSLGGIRD-MQKVPSAVWVEHIAVGEARKLGIPVIAILDTNDPDV--------VDYPIPGNDDA--IRSAALLTKVIASAVA |
4 | 5ng8Ab | 0.13 | 0.11 | 0.80 | 0.86 | DisCoVER | | IMKQLLEAGVHFGHQT---RR---W-----------NKM------------KKY---IFTE-----RNGIYIIDLQKTVKKVDEAYNFLKQVSEDGGQVLFVGT----KKQAQESVKSEAERAGQ--FYINQRWLGGLLTNYKTISKRIKRISEIEKMEEDLFEVLPKKEVELKKEYDRLIKFLGGIR-DMKSMPQALFVDPRKERNAIAEAIPIVGIVDTNC--DP-----DEIDYVIPANDDA-IRAVKLLTAKMADAIL- |
5 | 5o5jV | 0.19 | 0.15 | 0.79 | 0.65 | MRFsearch | | --KQLLDS-------------------------GAHFGHQ-TRRWNPKMKRFIFTDR----------NGIYIIDLQQTLTYIDKAYEFVKETVAHGGTVLFVGTK----KQAQESIAEEATRVGMPYVN--QRWLGGMLTNFSTVHKRLQRLKELEAMEQTGEGRTKKEILMLTREKNKLERSLGGIRDM-QKVPSAVWVVDIAVGEARKLGIPVIAILDTNCDP-------DVVDYPIPGNDDAI--RSAALLTKVIASAVA |
6 | 5ng8Ab | 0.16 | 0.13 | 0.81 | 1.58 | SPARKS-K | | ------------MAVISMKQLLEA---------GVHFGHQT-RRWNP-----KMKKYI-----FTERNGIYIIDLQKTVKKVDEAYNFLKQVSEDGGQVLFVGTK----KQAQESVKSEAERAGQ--FYINQRWLGGLLTNYKTISKRIKRISEIEKMEEDGLVLPKKEVVELKKEYDRLIKFLGGIRD-MKSMPQALFVERNAIAEARKLNIPIVGIVDTNDPDE--------IDYVIPANDDA--IRAVKLLTAKMADAIL |
7 | 2aw7B | 0.13 | 0.10 | 0.79 | 0.68 | MAPalign | | -------MLKAGVHFGHQ---------------------------------TRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELNKIASRKGKILFVGTK----RAASEAVKDAALSCDQFFVN--HRWLGGMLTNWKTVRQSIKRLKDLETQSQDGTFLTKKEALMRTRELEKLENSLGGIK-DMGGLPDALFVIAIAIKEANNLGIPVFAIVDTNS--DP-----DGVDFVIPGN-DDAIRAVTLYLGAVAATVR- |
8 | 5o5jV | 0.18 | 0.14 | 0.79 | 0.66 | CEthreader | | -----------------------------------------MAVVTMKQLLDSGAHFGHQTRRFTDRNGIYIIDLQQTLTYIDKAYEFVKETVAHGGTVLFVGTK----KQAQESIAEEATRVGMPYVN--QRWLGGMLTNFSTVHKRLQRLKELEAMEQTGGGRTKKEILMLTREKNKLERSLGGIRDM-QKVPSAVWVVHIAVGEARKLGIPVIAILDTNCD-------PDVVDYPIPGNDDA-IRSAALLTKVIASAVAE |
9 | 5o5jV | 0.19 | 0.16 | 0.81 | 1.14 | MUSTER | | -------------------MAVVTMKQLLD---GAHFG-HQTRRWNPKMKRFIF----------TDRNGIYIIDLQQTLTYIDKAYEFVKETVAHGGTVLFVGTK----KQAQESIAEEATRVGMPYVN--QRWLGGMLTNFSTVHKRLQRLKELEAMEQTGGFRTKKEILMLTREKNKLERSLGGIRDMQKV-PSVWVVDHIAVGEARKLGIPVIAILDTNDPDV--------VDYPIPGNDDA--IRSAALLTKVIASAVA |
10 | 5o5jV | 0.19 | 0.16 | 0.81 | 2.79 | HHsearch | | -------------------MAVVTMKQLLD--SGAHFGH-QTRRWNPKM-----KRF-----IFTDRNGIYIIDLQQTLTYIDKAYEFVKETVAHGGTVLFVGTKK----QAQESIAEEATRVGMPY--VNQRWLGGMLTNFSTVHKRLQRLKELEAMEQTGGGRTKKEILMLTREKNKLERSLGGIRD-MQKVPSAVWVEHIAVGEARKLGIPVIAILDTNDPDV--------VDYPIPGNDDA--IRSAALLTKVIASAVA |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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