Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | NRAPLTHKMNKMVTSEEQMKLPSTKKAEPPTWAQLKKLTQLATKYLENTKVTQTPESMLLAALMIVSMVSAGVPNSSEETATIENGP |
1 | 1pp1X1 | 0.12 | 0.08 | 0.68 | 0.61 | DisCoVER | | -----------------------PH-P-GIG--HEKDIRQNAVALLDQSRRDFHTVTPSLVFLCLLGVPRESYLVVKTAKFYGEKQ- |
2 | 5i6cA | 0.03 | 0.02 | 0.90 | 1.00 | DEthreader | | AA--F-HADI-DAAPAAS-VKTF--Y-IIVFIICACECIGDVTATCDVSRLERGGTFESRIQGAVLADGINSAAAMC-LIGIFAKAV |
3 | 2c4eA3 | 0.10 | 0.07 | 0.72 | 0.57 | CEthreader | | -----------------------IKAGKVIDPTGAGDSYRAGFLSAYVKGYDL-EKCGLIGAATASFVVEAKGCQTNLPTWDKVVER |
4 | 5tptA | 0.09 | 0.08 | 0.94 | 0.55 | EigenThreader | | RNRMDRVKKEWEEAELQAKHLARVEAMLND---RRRMALENYLAALQS--DPPRPHRILQALRRYVRAENKDRLHTIRHYQHVLAVD |
5 | 5e7qA1 | 0.06 | 0.06 | 0.90 | 0.26 | HHpred | | ---TIGDVLREHRRSHPGRTA-LVDGPVRLTWPELDDRVNRLAGSLAASGIGRNSFRVYELIAAAGKLGAV-CVGYWRWAPPE---- |
6 | 1r6bX1 | 0.11 | 0.08 | 0.72 | 0.42 | MRFsearch | | --VALRQELEAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGREVTGANVLVAIFSE---------------------- |
7 | 1pp1X1 | 0.16 | 0.14 | 0.84 | 0.46 | FFAS-3D | | -------------LPGKFLQYTVGGSDPHPHEKDIRQNAVALLDQSRRDFHTVTPSLVFLCLLLHAAFVHGGVPRESYLSTPVTRG- |
8 | 4ww0A3 | 0.12 | 0.09 | 0.77 | 0.85 | SPARKS-K | | RYEILKVHARNKKLAKDVDLEFVARATPGLTGADLENLLNEAALLAARKGKEEITMEEIEEALDRIT-------------------- |
9 | 2zbaA | 0.15 | 0.09 | 0.63 | 0.42 | CNFpred | | --------------------------------KALSELKDAATKTLDASSKFVSTDDALSAFIWQSTSRVRLARLDASTPTEFCRAV |
10 | 6d4hA | 0.05 | 0.05 | 0.93 | 1.00 | DEthreader | | LKFNAAQVLPFLALGVGVDDFLLTSVCLTAGVMVLALMTVELFGMMGLIGIKLSAVPVVILIASVGIGV-EVHVALLGLVLL----- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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