Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | GASFRGWKEVTSLFNKDDEQHLLEKCKSPRSKGTNLRLKEELKAEKKSGFWDNLVLKQNTQPKKPDQIEGWEPPKIAVEDVAADSGDTVSDHLSWPGWEDATKGSTKYTTLASSGNTSRWSIKSAGKLVSIRRQSKGNLTDNWEELE |
1 | 2pffB | 0.10 | 0.04 | 0.42 | 1.03 | MRFsearch | | -------DD-----------------------------------------------------------------DYGFKQGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGLYKTSK-------------AAQDVWNRAD |
2 | 2rdo75 | 0.06 | 0.05 | 0.83 | 1.01 | SPARKS-K | | --------------------AVMVYCAVGGVQPQSETVWRQANKYKVPRI--AFVNKMDRMGANFLKVVNQIKTRL--GANPVPLQLAIGAEEHFTGVDLVKMKAINWNDADQGVTFEYEDIRLNNEIILVTCGS-AFKNKGVQAML |
3 | 1nx9A1 | 0.03 | 0.01 | 0.51 | 0.59 | DisCoVER | | ------------TDQQ----------------------------------R---D--------------YIKREVMVPMVK-------LY-TVIVIPKNARNAPILLTRTPYNAKGRANRVPNALTMREVLPVGYIRVFQDIRYGS- |
4 | 2ptzA | 0.08 | 0.07 | 0.87 | 0.83 | DEthreader | | SHMT-IQKVHGR-EVLTVE-VEVTGVFLIGRDELKQELDTLMLRLDL-AILGCSMAISKAAAKVYLASLAGTELRLPVPFSALRMGSYAIC--------IVGDDVLLKIEAIASS---SHR-GETEDTY-IADLVALGI--AKLNLL |
5 | 6oc5A | 0.08 | 0.07 | 0.96 | 0.49 | CEthreader | | YVHTPFPNIVYALDLDQGAKIVW--KYEPKQDPSVIPVMCCDTVNRGLAYADGAILLHQAD----TTLVSLDAKSGKVNWSVKNGDPSKGETNTATVLPVKDKVIVGISGGEFGVQCHVTAYDLKSGKKVWRGYSIGPDDQLIVDPE |
6 | 6gaoA | 0.10 | 0.10 | 1.00 | 0.52 | EigenThreader | | KQVQVNVDDIRAANIKLDGLGRQIADISNSISTIESRLGEMDNRLVGISSQVTQLSNSVSQNTQSISSLGDRINAVEPRVDSLDTVTSNLTGRTSTLEADVGSLRTELAALTTRVTTEVTRLDGLINSGQNSIGELSTRLSNVETSM |
7 | 1fiuA | 0.14 | 0.09 | 0.62 | 0.26 | HHpred | | -------------------------------------------QHIRPGDWNVKQARYQQENPELAAALGSDY--TITPDIIRNLIAD--AEINRNEFLVD-ENIATYASLRAGNGSCKWTIRS-DRAQNARSERKGRLP------- |
8 | 3i6mA | 0.15 | 0.07 | 0.44 | 0.70 | MRFsearch | | ---------------GYEIEFVFG---LPLVKELNYTAEEEALSRRIMHYWATFAKTGN-------------------------PNEPHSQESKWPLFTTK-----------------EQKFIDL---------------------- |
9 | 6em3B | 0.15 | 0.12 | 0.80 | 0.29 | FFAS-3D | | -------------FTRHEEVMPLTAVPEPKRRFVPSKNEAKRV--------MKIVRAIREGRIIPPKKLKEMKEKEKIENYQYDLWGLRAPKLPPPTNEESYNPPEEY--LLSPEEKEAW------ENTEYSERERNFIPQKYSAL- |
10 | 3lg8A | 0.06 | 0.04 | 0.71 | 1.01 | SPARKS-K | | --------------------------EQPEYKDKLIKLIKDGAISLGGGELIVRL--------NKRDMELIDDSTLWNLEKENATKKVTVLKK------GEPVDIAGGCIIETADGLKSLDNSLEAIFNRNLNVIRARITEKLF--- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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