Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | MESRGKSASSPKPDTKVPQATTEAKVPPAADGKAPLTKSSKKEAPAEKQQPPAAPTTAPAKKTPAKADPALLNNHSNLKPAPTAPTVPSSPDATPEPKGPGDGAEEDEAASGGPGGRGPWSCENFNPLLVAGGVAVAAIALILGVAFLARKK |
1 | 2y26A2 | 0.08 | 0.07 | 0.84 | 0.67 | DisCoVER | | PGVF---------NGKFQFL----TCPPIF---FDLTAVTALRSA-----GLTLGQLGMGGTVRGRVHICAYSIVLWVVSEWNGNELFKYPGVYVEEDGSFEVKIRSHRT-PARLQRDMSSLNFYAIAGPIAAQLPIVVQID--EIVRPPS- |
2 | 6rw9A | 0.07 | 0.07 | 0.88 | 0.83 | DEthreader | | NLETAMKTDKNYTLASRRTPYNAFGISPKLY-NILT--EDTELDLENSLKPKVKIKDLMTLD-AL-ANYYELPA--DDIQ-----LIAAELPTPDVYN---KLVIPAIITFNAEPGIWL--LRLNKTLRLAKVSG-RNEALSGEYRSLVMNL |
3 | 1kb9E | 0.13 | 0.11 | 0.88 | 0.57 | CEthreader | | MTATADVLAMAKVEVNLAAIPLGKNVVVKWQGKPVFIRHRTPHEIQEANSVDMSALKDPQTDADRVKDPQWLIMLGICTHLGC-----VPIGEAGDFGGWFCPCHGSHYDISGRIRKGPAPLNLEIPAYEFDGDKVIVG------------- |
4 | 3hhmB | 0.03 | 0.03 | 0.99 | 0.52 | EigenThreader | | QNAEWYISREEVNEKLRDTADGHRDGKYGFSDPLTFSSVVELINHYRNESLAQYNPKLDVKLRLYEEYTRTSQEIQMKRTAIEAFNETIKIFEEQCQHNYDKLKSRISEIIDSRRRLEEDLKKQAAEYREIDKRMNSIKPDLIQLRKTRDQ- |
5 | 2yewC | 0.15 | 0.08 | 0.54 | 0.35 | HHpred | | -----------------------------------------------------------------PMYPTLFSISLGKDPSHSQEDTPMSKTIQVGAEGVGNNNPAQKSSSSSAHG---NPISDLYPYWTITVLASLGLLIVISSGFSCF-- |
6 | 2mkvA | 0.20 | 0.06 | 0.30 | 0.48 | MRFsearch | | -----RWYLGGSPKGDV------------------------------------------------------------------------------------------------------DPFYYDYETVRNGGLIFAGLAFIVGLLILLSRR |
7 | 2xd8A | 0.10 | 0.09 | 0.89 | 0.46 | FFAS-3D | | ------MANANQVALGRSNLSTGTGYGGATDKYALYLKLFSGEMFKGFQHETIARDLVTKRTLKNG-------KSLQFIYTGRMTSSFHTPGTPILGNADKAPPVAEKTIVMDDLLISSAFVYDLDETLIGYALAEKYDRLIFRSITRG--- |
8 | 4k0mC | 0.17 | 0.14 | 0.82 | 1.31 | SPARKS-K | | EEAGADYVGGEEIIQAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA-----AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA----------------------- |
9 | 5mz61 | 0.12 | 0.03 | 0.21 | 0.47 | CNFpred | | ------------------------------------------------------------------------------------------------------------------------IPAKLCFFYFYNGELCRAVVCLLDYIDLSDDT |
10 | 6tgbA | 0.03 | 0.03 | 0.85 | 0.83 | DEthreader | | G-----GGGGMPGGGGGGGGGGGGG------------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGKFTNKFLEFLWNNICFIPKNEILREEMYYLYK-LRDLHLDCDN--KGK-PD--YRGTVQPVFHYSRRTSTTISPLENFEYVRDHP |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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