>PF15672 (314 residues) SHGEENQDKSTTQSIAEVFKTMENKPISLEGKANLNSEKENRTTSDLKASHSPPLNLSNK SHGITDFSSNLSAEHPSGSVKPTSTISTSPPLIHSFVSKLPWNASIADEDPLPFSAHPNA TPALSSEKFTWSLISDTTNTPDNSSITVSILSSEPASTSVTPLIVEPSGWLTTNSDGFAG FTPYQEKTTLQPTLKFTNNSKLFPNTSDPQKENRNTGIVFGAILGAILGVSLLTLVGYLL CGKRKTDSFSHRRLYDDRNEPVLRLDNAPEPYDVSFGNSSYYNPTLNDSAMPKCQENAHD GIPMDDIPPLRTSV |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 | | | | | | | | | | | | | | | | |||||||||||||
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Seq | SHGEENQDKSTTQSIAEVFKTMENKPISLEGKANLNSEKENRTTSDLKASHSPPLNLSNKSHGITDFSSNLSAEHPSGSVKPTSTISTSPPLIHSFVSKLPWNASIADEDPLPFSAHPNATPALSSEKFTWSLISDTTNTPDNSSITVSILSSEPASTSVTPLIVEPSGWLTTNSDGFAGFTPYQEKTTLQPTLKFTNNSKLFPNTSDPQKENRNTGIVFGAILGAILGVSLLTLVGYLLCGKRKTDSFSHRRLYDDRNEPVLRLDNAPEPYDVSFGNSSYYNPTLNDSAMPKCQENAHDGIPMDDIPPLRTSV | |||||||||||||||||||
1 | 2vowA | 0.07 | 0.06 | 0.79 | 0.52 | DisCoVER | KNPGTYSSPVINF--K-IASPPGPPRDFSGYSYSLAIG-K--TS-YYDPTTGTKWNDDTITPVSDGQ-DIWRGWTHT-GKWSFFNGKAGDKITLSVQGAHPGFILFW---RPEGGPLFWAGTQDLDEGQTALDSDTVI--GHVIVQHAWTLQLPPKADHTAPVYMKPDSYT-----------MY---YVDSGYDADKYKK--LIMHPTAFKG---LALNDGTA--GAFTKSITL-PKTGYYML------YV--AN-----VLEVDDWSVDADGKLTTTGEVWEVPAKGCW-----------V-N--ITIS--K- | |||||||||||||
2 | 3wkwA | 0.03 | 0.03 | 0.74 | 0.67 | DEthreader | -KSHDFHGMFQDSDVYKWLECTVDAQGYLDT-PYQIKSGVWDRPRFEMMVAKKMADCLD----ANF--GPE-EGK----IHGADPIELALAKL-----------YLTLSQ-LI----DVRGQDPQF--YAKQ-----LKAMNDNIFYFQAPVRDQQT---VGCTGVAV--------RFWKNIVTRR------GAIGSTHFTYDYDLPN-D--T-M-Y--GE--TC-ASVAMSMFAQQMLDKGEYAD-VL--EKELFN----GSAGISLGKQYYYVNAVLSHRLVYCAEQVN-DLWNY--VPYYS---------- | |||||||||||||
3 | 2ecfA | 0.08 | 0.08 | 1.00 | 0.56 | CEthreader | KEQDIYLARVNWRDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDGSILWSSERTGFQHLYRIDSKGKAAALTHGNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPLQGGQPQRLSKAPGMHSASFARNASVYVDSWSNNSTPPQIELFRANGEKIATLVENDLADPKHPYARYREFGTLTAADGKTPLNYSGGPASQTVTDSWPGRGDHLFNQYLAQQGALYGKQGTVEVADQLRGVAWLKQDPARIGVQGWSNGGYMTLMLLAKASDSYACGVAGAPVTDWGLYDSHY | |||||||||||||
4 | 6v9iC2 | 0.06 | 0.05 | 0.97 | 0.60 | EigenThreader | CSNPEDKLQIYRDNFEKAYLDSTERFYRTQAPSYLQQNGVQNYMKYADAKLKEEEKRALRYL------ETRRECNSVEALMECCVNALVTSFKETILAECQGMIKRNETEKLHLMFSLMDKVPNGTITTDSEKYVEQLLTLFNRFSKLVKEAFQDDKCPELLANYCDMLLRLVLKYVQNKDVFMRYHKAHLTRRLILDISADSEIEENMVEWLREVGMLNQAFKEMHELEDPEVEEFYKKNHSGRKLHWHHLVTTFQLAVLFASFENLKLATELPDAELRRTLWSLVAFPKLKRQVLPQVNSPK---DFTEGTL | |||||||||||||
5 | 6jxrf | 0.13 | 0.05 | 0.38 | 0.49 | HHpred | -------------------------------------------------------------------------------------------------------KVSISGTTVILTCPQYP-----GSEILWQHNDKNIGGDEDDKNIGS----DEDHLSLKEFELEQSGYYVCYPRGSK-----PEDANFY--LYLRAR-------VCENCMEMDVMSVATIVIVDICITGGLLLLVYYWSKNRK--------------------------------------------------------------------- | |||||||||||||
6 | 2k9yA | 0.21 | 0.03 | 0.12 | 0.37 | MRFsearch | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QTLSPEGSGNLAVIGGVAVGVVLLLVLAGVGFFIHRRRK--------------------------------------------------------------------- | |||||||||||||
7 | 5mqfT | 0.14 | 0.13 | 0.93 | 0.42 | FFAS-3D | ---KNSLAYQRMS--------WEALKKSINGLINKVNI------SNISIIIQELLQENIVRGR--GLLSRSVLQAQSASPIFTHVYAALVAIINSKFPQIGELLKRLILNFRKGYRRNDKQLCLTASKFVAHLINQNVAHEVLCLEMLTLLLERPTDDSVEVFLKECGLKLTQVSPRGINAIFERLRNILHESEIDKRVQYMIEVMFAVRKDINLVSFLCNMILDCCAQQKFFGLLAGRFCMLKKEYMESFEGIFKEQYDTIHRLETDSLPWSIKLSEETTTSSSLKDETLQPFFEGL---LPRDNPRNTRFAI | |||||||||||||
8 | 6f1tg | 0.07 | 0.06 | 0.94 | 0.95 | SPARKS-K | ---LTEEEKQQILHSEEFLSFFDHSTRIVERALSEQINIKLSLNRQFFDERWSKHRVWSSQYPELLVASYNNNEDAPHEMKYKKTTPEYVFHCQSAVMSATFAKFRSNKRTPVQRTPLSCVNVVGTQNISISTDGKSLDMLSHPQDSMELVHKQSKAVAVTSMSFPVVNNFVVGSEEGSVYTACRHGSKAGISEMFEHQGPITAAVGAVDFSHL---FVTSSFDWT-----------VKLWSTKNNKPL---YSFEDNAGYVYDVMWSPTHPALFACVDGWNLNNDTEVPTASISVEGNPALNRVRWTHSGREI | |||||||||||||
9 | 6bq1A | 0.06 | 0.04 | 0.61 | 0.67 | DEthreader | GGGG------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAFMELEHLLWS--LM---KDFARCGIL---------------------------------------TVTKSHLQLLAMATIFSLLRYFKAMLISSKDC-KDG--------------------------QAGENSVNWRKYSLSEKTEAIGNVTVEAKTDPPAFYIPQHQFWNYEFDFFNKILKVQIDYPMAPFKVGDDPGC-------LVTLMLDTGLP-------------------------------------- | |||||||||||||
10 | 2atyA | 0.09 | 0.09 | 0.98 | 0.78 | MUSTER | GSPPPILNGRISYY---STPIAVGTVIRYSCSGTFRLIGEKSLLCITKDKVDGTWDKPAPKCEYFNKYSSCPEPIVPGGYKIRGSTPYRHSVTFACKTNFSMNGNKSANNMWGPTRLPTCVSVFPLEGSIEGRGGSELADPEVPRDCGCKPCICTVPEVSSVFIFPPKPKDVLTITLTPKVTVVVDISKDDPEVQFSDDVEVHTAQTQPREEQFNSTFRSVSEL--PIMHQDWLNGKEFKCAFPAPIEKTISKTKGRPKAPQLYTIPPPKPEDITVGQPAENYKNTQPIMNTNEKSNWEAG-EGLHNHHTEKSL | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |